| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0880 |
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| Symbol | bsmA |
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| ID | 6962218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 964951 |
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| End bp | 965607 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382148 |
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| Product | cell aggregate formation protein, biofilm development BsmA |
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| Protein accession | YP_002265179 |
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| Protein GI | 209809640 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACATT CTCACGATAC GTCCTTACAG TTGACTCAAT TGAGTTATGA CGCAGTTCAT
CAACTCGCCC CCTCCTTCTC TGGGTTGCCT AAAACCATGC ACGCGGATGG TAACTATCGA
TTAAGACGTT ACTCCGTGAT CTGTGTTGTT AATAACGATG TAGTGGAAAC AAATAAGCAT
AACTTTGTAC AAAGTGAAGA CATCAATCAC TTTCAAGGTG ATGTTGTTCG TGAATTTGAA
GGCATTGAAA AGGCGATTCT TCACAGTGAA GGTATGGCTG AAATGTGTCA AGTATTCATG
GAGCTAAACC ATTTACCCAA TGGGCAAGAA ATAGAAATCC ATCAAATGCG TATTGCCGCT
ATTTACAAAG AAACCCAAAT CGCACCAGAA GGTATTCATC AAGATGGGTT CGATCACATT
GCCCTTATTG GTATTGATCG TTCGAATATT GAAGGCGGTG AATTACTGAT TTATAAAGAT
TCAGAAGAAG CCCCATTTTT TAGAAAGATC TTAGAAGACG GTGAAGTGGC AATGGTTGAC
GATAGAAAGT TGTGGCACAA CGGTCAGCCG ATCCGCTTAA TCGATCAAAA CCATGAAGGA
CATATGGATG TTTTTGTACT AACGGCTAAG GATAAGAACG ATGAACTTCA CTCCTAA
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| Protein sequence | MLHSHDTSLQ LTQLSYDAVH QLAPSFSGLP KTMHADGNYR LRRYSVICVV NNDVVETNKH
NFVQSEDINH FQGDVVREFE GIEKAILHSE GMAEMCQVFM ELNHLPNGQE IEIHQMRIAA
IYKETQIAPE GIHQDGFDHI ALIGIDRSNI EGGELLIYKD SEEAPFFRKI LEDGEVAMVD
DRKLWHNGQP IRLIDQNHEG HMDVFVLTAK DKNDELHS
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