Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0867 |
Symbol | |
ID | 6962551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 951624 |
End bp | 953492 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643382138 |
Product | hypothetical protein |
Protein accession | YP_002265169 |
Protein GI | 209809630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.494606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTATTA TCTTACCCTT AATTCTTGCT GGCCCTATTG TTAGAAAATC AAGCCCAACA GAAGTGAACC TATGGCTCAC AACCTCTGAG CGTCTTGAAG GACATACAAC AATTCAATGC GGGTTGCACT CACACCAGTT CATCATCACA GACGAACAAG GCATTAACAT TGGCCAGAAT GCTTGGGTTT ACCTACTGCA ATGCAAAGAA AGTTTTCCTG TAAACCAAGC GCTTTATTAC GACATAACGA CTCAACATGG CTCATTATCG AGTTTGTTGC CTCATGCCTT ATATCCAAAC GAAACAACAT TTTCTTTCAT CATCAAAGAC AAAGCCGATT ATGTACTGCA TGGGTCTTGC CGTAACCCTC ATTACCCAAG TAAAGACAGT TTAGTTATTG CAAACCAACA ACTAAAAACA CAAGCAATAG AAGAAAGAGC CGCTTTATTG ATGATGAGTG GAGATCAAAT CTATGCGGAT GATGTTGCAG GGCCAATGTT AATCGCTATT CAACAAATTA TTCCTCAATT AGGTTTATTT GAAGAAATAC TGCCGGACTC AACAATACCA ACGGGATCTT CATTATATTC ACATGAGCAT AATCTCTATT ATCGCGATAA AATATTGCCT CATTATATCG ATAATACTAA TTTCCTTTCT CGATGGAATT TATATAAATC TCGCCCAATT TTTAGCTCTA CCGAACACGA AAACCATCTA ATGACCTTTT CTGAGTTTTT TGTCATGTAC CTATTGGTGT GGTCTCCGAC ATTATGGGAT TGTGTCTCTT TACCTGAATC CCTGCCAAAT CTCGATAAAA AATGGCAGCA GTGTTGGAAA AAAGAAAAAC AAATTATTGA ACAATTTGTT TTAGGCCTTA AAGACGTTCA GCAATTGTTT GCTCATATTC CCACCTATAT GATCTTTGAT GATCACGATA TCACTGACGA TTGGAACTTA ACGATTGGCT GGGAAAACGC CGTTAATGGT CACCCTCTTG CCGCTCAGGT CATTGGTAAT GGATTAATGG GGTACTTTCT TTGTCAGGGA TGGGGGAATA ATCCAGAGCA ATTCGACGAG GATTTTCTTG ATCGCTTTCG TGAGCTCTTT AGTCATTATG ATCATAAAAA ACATACGCAA ATTATTCATC AACTTACTCG ATTTGAGGAA TGGCATTACT CTATTCTTAC GACTCCAAAA ATCGTAGTAT TGGACACAAG AACCCGCCGT TGGCGCTCAG AATCAAACGC CAATAAACCC TCTGGCCTCA TGGATTGGGA AGCGATGTTA GATTTTCAGC ACGAACTTAT TGGGCAAGAG GCCATCATTA TTGTCTCTGC TGCACCAATT TTTGGTGTGA AGTTTATCGA AGCCTTACAA AAAACAATGA CCATTCTAGG TCAACCTTTA GTTATTGATG CAGAAAACTG GATGGCTCAC CCAGGATCCG CAAATACCTT ATTAAGTATT TTGACTCATC CTAAAACGCC TCAAAATTTT GTTATTCTAT CTGGTGATGT GCATTACTCT TTTGCTTATG ACATCAAGTT ACGTCACAGT AAATCGAGTC CTGATATCTA TCAAATCACC TGTAGCGGGT TTAAAAATGA ATTTCCCAAT ACGTTGCTTC GTTTCTGTGA CTTTATGGAT AGAGTGCTTT ATAGCCCACA TTCACCATTA AATTGGTTTA CGAAACGTAA AAATTTAGTC GTAATAAAAC GAGATCCGTC AGTAACCAAT AACGATAAAT TGATCAACAA GAGTTCTATA GGGGAATTAA GGCTGGATGA CAAAGGCAAG CCGGTACAGA TTTCGATTTT AACCGCGGAA GGGGAATCTA TTTCCTTTTT GCCTAAATCA AGTGATTAG
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Protein sequence | MPIILPLILA GPIVRKSSPT EVNLWLTTSE RLEGHTTIQC GLHSHQFIIT DEQGINIGQN AWVYLLQCKE SFPVNQALYY DITTQHGSLS SLLPHALYPN ETTFSFIIKD KADYVLHGSC RNPHYPSKDS LVIANQQLKT QAIEERAALL MMSGDQIYAD DVAGPMLIAI QQIIPQLGLF EEILPDSTIP TGSSLYSHEH NLYYRDKILP HYIDNTNFLS RWNLYKSRPI FSSTEHENHL MTFSEFFVMY LLVWSPTLWD CVSLPESLPN LDKKWQQCWK KEKQIIEQFV LGLKDVQQLF AHIPTYMIFD DHDITDDWNL TIGWENAVNG HPLAAQVIGN GLMGYFLCQG WGNNPEQFDE DFLDRFRELF SHYDHKKHTQ IIHQLTRFEE WHYSILTTPK IVVLDTRTRR WRSESNANKP SGLMDWEAML DFQHELIGQE AIIIVSAAPI FGVKFIEALQ KTMTILGQPL VIDAENWMAH PGSANTLLSI LTHPKTPQNF VILSGDVHYS FAYDIKLRHS KSSPDIYQIT CSGFKNEFPN TLLRFCDFMD RVLYSPHSPL NWFTKRKNLV VIKRDPSVTN NDKLINKSSI GELRLDDKGK PVQISILTAE GESISFLPKS SD
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