| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0858 |
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| Symbol | bioC |
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| ID | 6962438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 942115 |
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| End bp | 942942 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382129 |
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| Product | biotin synthesis protein BioC |
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| Protein accession | YP_002265160 |
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| Protein GI | 209809621 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATC AAGCTGTCGC CATAGACGCC GAATATTGGA TTAAAAATCA CAGTAAAAAT
AAAGAAGCGA TTGCTGCTGC ATTTAGTAAA GCGGCTCATA CTTACGATCG CTCGGCAGAG
TTTCAACGTC AAGTCGCGGA TCATCTTATG TCGTATTTAC CAATAAAATT AGATGGGGTG
CGTGTTCTTG ATATCGGTTG TGGTACTGGA TATTGCAGTG AACAACTGCT GAATCGTGGG
GCAACCGTTG TTGCATTTGA TTTGGCTCAT GCAATGCTGG TCAAAGCGAA AGAACGTTGC
GGTGATTATA ACATTTCTTA TGTTCAAGGT GATGCGGAAG ATCTTCCTTT TGATGTGAAT
GAATTTGATG TAGTGATTTC TAGTTTAGCG TTGCAATGGT GTCAGGATTT ATCTGTTCCT
TTAGCTGAAA TGAAACGAGT TACCGAAAAT AAAGGCAAGG TTATATTCTC AACTTTGCTA
GATGGATCTC TGTTTGAGTT AAAAAAAGCA TGGTCAAAGG TTGATATATA TCAACATGTG
AATGAATTCA TTACCTTATC GGCTGTAAAC CTTGCGTTAG CGCAATCTGA GAACCATTCC
TATCAACTAG ACTGCATTCC TGTTGAGATG ATGTACTCTT CTGCGACAGC TTTAATGAAG
GATTTAAAAG GCATTGGAGC AACGCATTTA CCTAGTGGCC GACAGTCAGG TTTGCTGAGT
AAGCAAAAGC TATTAGCAGT AGAAGAGGCA TATCAAATGT TTAAAAATGA ATTTAACCGC
TTACCTGCAA CGTATCAGGT GGGTTATGGA GTTATACGTA ATGATTGA
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| Protein sequence | MVNQAVAIDA EYWIKNHSKN KEAIAAAFSK AAHTYDRSAE FQRQVADHLM SYLPIKLDGV
RVLDIGCGTG YCSEQLLNRG ATVVAFDLAH AMLVKAKERC GDYNISYVQG DAEDLPFDVN
EFDVVISSLA LQWCQDLSVP LAEMKRVTEN KGKVIFSTLL DGSLFELKKA WSKVDIYQHV
NEFITLSAVN LALAQSENHS YQLDCIPVEM MYSSATALMK DLKGIGATHL PSGRQSGLLS
KQKLLAVEEA YQMFKNEFNR LPATYQVGYG VIRND
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