| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0854 |
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| Symbol | |
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| ID | 6962199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 938924 |
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| End bp | 939991 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643382125 |
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| Product | secretion protein, HlyD family |
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| Protein accession | YP_002265156 |
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| Protein GI | 209809617 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTG CAGAACAAAA ATTTAAACAA TGGATGCGAA TCCTAATCGT CTTATTTCTC
ATTGTAACCG CGTATCTGGT CATGTCAGAC AGATTGACGC CATTAACTAC GCAAAGCAAA
GTACAAGGAT TTGTTGTTCA GATTTCACCT GAAGTGTCTG GCCGCATTGT GGAAGTTAGC
CATACAAATA ATCAGTTAGT AAAGAAAGGG GAATTATTGT TTAAAATTGA TGATGAAAAA
TATCAATTAG CGGTGAGAAA AGCAGAGATA GCATTGGCTC AAGCTCGAGA GCAAGAAGCG
TCATTAGTCG CTGATATTGA AGCATCACGA TCAAACGTAA GAACAACACA AGTTACTGCG
GATAATGCTA ATCGTGAATA TCACCGAATT AAAAGACTTG CGAAATCTGG AGCGGTGTCA
GTCTCTGGAT TAGATTCGGT CTTAACTAAA AGAGATCAAT CATCGGCAAA CCTTATGGCT
GCTAAGCAAA AAGTACATGC ACTAGAAGTG AAACTAGGGA AAGGAGATGG TCAAAGTAGT
GCGGTGTTAT CGGCTAAAAA TACATTAAAA CAAGCGCAAC TTGATTTAGA GAACACACAA
GTAATTGCTC AAAATGAAGG TATTATCACT AATATGCAAT TACACGTAGG TGTATTTGCT
AATGCAAACC AACCATTACT GACGTTCATT CCTACTGATT CGCTGTGGAT CTCAGCAGAT
TATCGTGAAA AAGCGACATC AAAGATGAAT AAAGGAATGA AAGCTGAAGT TGCTTATGAT
GCAATGCCTG GTGAGGTTTT TCCATTAACC GTTGAAAGCC GAGATTATGG TGTCGCGTCG
GCGCAGCAGA AGGCTAATGG ACAGTTAAGC AGTGTTGAAG TCAGTAATCG TTGGGTACGT
GACGCTCAAC GAGTAAGAGT GAACTTGATT AGCTCTGAGT CCTTGTCACC GCGCTTATTT
GTGGGTTCTA GAGCTACGGT TATTATTTAT ACGTCAGGCA ACAATATCAT TGATTATATT
GGACACAGCT TGATCGTGAT GATCAGCTAT TTACATTATA TTTATTAG
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| Protein sequence | MQAAEQKFKQ WMRILIVLFL IVTAYLVMSD RLTPLTTQSK VQGFVVQISP EVSGRIVEVS
HTNNQLVKKG ELLFKIDDEK YQLAVRKAEI ALAQAREQEA SLVADIEASR SNVRTTQVTA
DNANREYHRI KRLAKSGAVS VSGLDSVLTK RDQSSANLMA AKQKVHALEV KLGKGDGQSS
AVLSAKNTLK QAQLDLENTQ VIAQNEGIIT NMQLHVGVFA NANQPLLTFI PTDSLWISAD
YREKATSKMN KGMKAEVAYD AMPGEVFPLT VESRDYGVAS AQQKANGQLS SVEVSNRWVR
DAQRVRVNLI SSESLSPRLF VGSRATVIIY TSGNNIIDYI GHSLIVMISY LHYIY
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