Gene VSAL_II0851 details

Gene Information

• Locus tag: VSAL_II0851
• ID: 6962196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 936714
• End bp: 937358
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 643382122
• Product: putative transcriptional regulator
• Protein accession: YP_002265153
• Protein GI: 209809614
• COG category: [K] Transcription
• COG ID: [COG3710] DNA-binding winged-HTH domains

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTGCAG TTTATAAAGC AGAAAAGTAT ACATTCAACA TGCCACACTA CATAATTCAA 
CACCCAGAAA AAGGCGATGT TGAACTATCT AGGGCTGAAG CTTACATTCT AAAAAAAATG 
CTTGATAATC TAAACATCGT TTGTAACAAA AACGAACTTG AAGATATAGG TTGGGAAGGT 
AACCCTGTTA GCACCTCAAG CTTAACGGTT GTGATTGCCT CTCTCAGAAA AAAAATACAT 
TCAATAAATG ACTTTAGTAT CAGAAATATA CCAAGAAAAG GATACTTTAT TTCAACATCA 
TTAATTATAG AAAAAATAGG CGTCCAATCA AAAAAAACTC CATCTCCGAA AAACTCATCA 
TTTTATACTA AATTTAAGAA AATCATATCC GTATGTATTT ACACATTTAA TATTCTAATG 
GTGATTTTAT TCATTATAAT TGGATTATTT GTTAGCATTC AACATGATTA TTTATCATGC 
CAAAAATTAA ATAACAAAAC ACTTTGTTCT ATTGGAACGA ATAACTTCAG CACATTGAAC 
CTTCTTGATG ACATCGATGA TGGACAAGTC ATATTAAAAA CACCAGAAAA CACGATCATC 
CTAGACGAAG GTTCAAATAT ATTAATGAGT ATTGGAAATG ATTAA 

 

Protein sequence

MSAVYKAEKY TFNMPHYIIQ HPEKGDVELS RAEAYILKKM LDNLNIVCNK NELEDIGWEG 
NPVSTSSLTV VIASLRKKIH SINDFSIRNI PRKGYFISTS LIIEKIGVQS KKTPSPKNSS 
FYTKFKKIIS VCIYTFNILM VILFIIIGLF VSIQHDYLSC QKLNNKTLCS IGTNNFSTLN 
LLDDIDDGQV ILKTPENTII LDEGSNILMS IGND