Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0826 |
Symbol | |
ID | 6962173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 906482 |
End bp | 907273 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643382093 |
Product | membrane protein |
Protein accession | YP_002265132 |
Protein GI | 209809593 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.293934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATCAG CCTTAGACAT TAGTTGGTCA CTCATGGGTT TATTCAGCCT GACTCTCCTT ATCCCATTCT CTATCAATCG TTTCTATCAG TTAAATCTCG CTAAAGATAT CACCGTCAGT GTGCTTCGAA TGGTGGCTCA ACTTGTATTC ATTGGTTTAT ATTTAGAATT TGTGTTTCAA CTGGATAATC CCCTATTAAA TGTGGTTTGG ATCATCGCGA TGATCAGCAT TGGCTCTAGC TCTATTGTGT CTAAAGCCAA GCTTCCAAAA CGTCACATTT TCTTCCCTGT ACTTATAGGG CTTCTTATCG GTTTATCACC TTTGCTGCTG CTATTGAGCG GGTTAATTAT TCAGCCTACC CCATTTTACA GCGCTCAATA TCTGATCCCT CTTGCAGGCA TGCTATTGGG CAACAGTTTG AGTGGCAATA TCGTGGCACT GCAAAATCTC TTCACTTCGT TTAAAGAGCG AGAAAGTGAA TATCACGCAG CGATTGCGCT AGGGGCATCC CCTCAATATG CGTCAATTCC ATTTGTTCGT GCTGCGATGC AAAAAGCGTT TGCTCCTATC ATGGCATCAA TGGCCACCAC AGGATTAGTT ACGCTACCGG GCATGATGAC AGGCCAAATT TTAGGCGGTG TAAACCCAAT GGTTGCCATC AAATATCAAT TACTGATTTT AATCGCCATT TTTGTCATGC TGACTATTTC TGTCACCATC ACTCTGCAAC TCACCATTAA AAATAGCATT ACAAAAGAAG GGAAAGTGTT GGTATCACTA CCGACTGATT AA
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Protein sequence | MQSALDISWS LMGLFSLTLL IPFSINRFYQ LNLAKDITVS VLRMVAQLVF IGLYLEFVFQ LDNPLLNVVW IIAMISIGSS SIVSKAKLPK RHIFFPVLIG LLIGLSPLLL LLSGLIIQPT PFYSAQYLIP LAGMLLGNSL SGNIVALQNL FTSFKERESE YHAAIALGAS PQYASIPFVR AAMQKAFAPI MASMATTGLV TLPGMMTGQI LGGVNPMVAI KYQLLILIAI FVMLTISVTI TLQLTIKNSI TKEGKVLVSL PTD
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