Gene VSAL_II0825 details

Gene Information

• Locus tag: VSAL_II0825
• ID: 6962172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: +
• Start bp: 905860
• End bp: 906309
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643382092
• Product: putative phosphotransferase enzyme II, A component
• Protein accession: YP_002265131
• Protein GI: 209809592
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.212876
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAT TTGATTTAAT TGGTAACGAC GGCATCGTTA TTACCTCAGC TGAAAACCTA 
ACGGTTGATG CGGCACTTGA TTTAACCTGC TCTGCTTTAT TAGCAAAAGG GAAAATAAAA 
CAAAGTTATT TAGAGGCAAT TAAACAAAAA CACAAAGAGA TTGGCGCGTA TTATGTTTTG 
GCTCCTAAAA TTGCCATGCC ACATGCTCGT CCTGAAGACG GCGTAAATGA AGCGGCACTG 
CAAGTCACTG TGTTTAAGAA TGGCGTCAAT TTAGAATCTG AAGATAACGG GGATGTGTTC 
ATTTCTATCA CGTTAGCGGC AATGGATTCA GACAGTCATA TTCATACAAT TATGGCGTTA 
TCTGAACTCT TCCAAAATGA CGACGATATT GAAAAAATCA TTAACTCTGA TTCAATCGAA 
GAGATTGCTG AGATCATGAA GCAATACTAA 

 

Protein sequence

MSLFDLIGND GIVITSAENL TVDAALDLTC SALLAKGKIK QSYLEAIKQK HKEIGAYYVL 
APKIAMPHAR PEDGVNEAAL QVTVFKNGVN LESEDNGDVF ISITLAAMDS DSHIHTIMAL 
SELFQNDDDI EKIINSDSIE EIAEIMKQY