| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0820 |
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| Symbol | |
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| ID | 6962562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 900099 |
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| End bp | 900878 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643382087 |
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| Product | HTH-type transcriptional regulator, AraC-family |
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| Protein accession | YP_002265126 |
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| Protein GI | 209809587 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTGA ATTGGATTTC TCCTGCTCAA ATCATCATGT TGCCGGAAGA AAGAGACCTC
CATGCCCACG AACATCATCA ATTGGTGATA GGGTTAAAAG GGCAGTCAGA GTTTGAAATA
AACGGGGAGA GCAGCGTTAT TTCCGTAGGA AAAGTGGGAG TGATCCCTTC GCATCATCAG
CATGCATTTT CAAGTCTGTA TCAATCTGAA ATCTTAGTAC TTAATTTTCC TAAATATTTT
GAAGATCTAG AACTTGCCTC GCGGGTGAAC TCATTATTTG CACATTCTGG TTACTATCGA
CTAGATACTC AAATTCAAAA CTTAATTCAG CTATTAGTGT GTGAGATTCA AGCGAATCTT
AATGATCATC TGTTAAGTCG CGCTTGCAGT GATACGATCA TCGCGCTATT ACACCGTCAT
TTAATTGATG AAAATTCTGA CAAAAGACAA AAACGCCTGA ATTCCGATGT GATCGACAAT
TTTATAACGC AACATATCGG AACTAAGATC ACAGTTTCTC AGTTGGCTAG TACGGTTTTT
ATCGGCGAGA GTCAATTTTA TGCCATTTTT AAGCAAGAAT TTAGAAAAAC GCCACATCAA
TATATTATTA CGAAACGTAT TGATTATGCC AAAGTCTTGT TAACGGAAAG TAACCTCAGT
ATTGGAGAGA TTGCTCAACA AACGGGGTTT GCTAACCAAA GTGCATTTAG TCATGCATTT
GTGAAACACA AAGGAAGTTC TCCCACCAAA TATCGCCATT CTCACTTTAT TCGTAACTAA
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| Protein sequence | MTLNWISPAQ IIMLPEERDL HAHEHHQLVI GLKGQSEFEI NGESSVISVG KVGVIPSHHQ
HAFSSLYQSE ILVLNFPKYF EDLELASRVN SLFAHSGYYR LDTQIQNLIQ LLVCEIQANL
NDHLLSRACS DTIIALLHRH LIDENSDKRQ KRLNSDVIDN FITQHIGTKI TVSQLASTVF
IGESQFYAIF KQEFRKTPHQ YIITKRIDYA KVLLTESNLS IGEIAQQTGF ANQSAFSHAF
VKHKGSSPTK YRHSHFIRN
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