| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0817 |
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| Symbol | putP |
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| ID | 6962166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 894423 |
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| End bp | 895919 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643382084 |
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| Product | proline permease |
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| Protein accession | YP_002265123 |
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| Protein GI | 209809584 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAA ATAACTTTGC CATTACAGGC ACGTTTTTAA CTTACCTTGT TGTGATGCTC
GCTATTGGTA TTTATGCTTA TAAACGTACC AACAATTCAT CAGATTACTT TTTAGGTGGA
CGTACATTAG GGCCTTGGCC TGCTGCATTA TCTGCCGGTG CTTCAGACAT GAGTGGTTGG
TTGCTGCTTG GTTTACCAGG TTATGCTTAC GCTGCCGGTC TTGAGTCATT ATGGCTTGCG
GGTGGTCTAC TACTTGGTAC TTGGTTAAAT TGGTTGATCT GTGCTAAACG TCTAAGAACG
TACAGTATTA CTACGGATGA TGCCTTAACT CTGCCGGAGT ATTTATCTCG CCGATTTAAT
GATAATTCAA AATTGATTCA GACAATTTCT GCTTTGTTTA TCCTTCTGTT CTTCCTTTTC
TACACCAGTT CAGGCTTGGT TGCTGGCGGT AAATTATTTG AAACTGTATT CGGTCTTGAT
TATAAAGTTG CCGTTGTTAT AGGCACGCTG TGTGTTGTTT CATATACTTT ATTTGGTGGT
TTCCTTGCGG TTGCTTGGAC GGATTTGGTT CAAGGTTTAT TAATGTCAGC GGCATTGATG
ATCGTACCAA TTGCAGCAAT GCAGGGTGGA TTCAGCCAAC TTAATACTGA TCTTGTGGCG
ATTAACCCTG AGTTACTGAC GTTATGGACA GGTATGGACG GTAACCCACT AAGTGCGGTG
GCTATCATCT CATTAGCGGC GTGGGGCTTA GGTTACTTTG GTCAACCTCA TATCCTTGCT
CGTTTCCTTG CTTCTCGTTC AAATAAAGAT TTAACGACCG CTCGTCGTAT TGCGGTTATT
TGGACTGCGC TTTCAATGGC AGGTGCAGTA TTAGTTGGTC TTGTTGGTTT GCTTTATGTT
AATGGTGAAA TGGCAGGTCA AGTGATTGAT GGTGAAAAAG TCTTCATGTT ATTAGTGAAT
GCGATTTTCC ATCCTGCGAT TGCGGGTATC CTACTTGCCG CTATTCTTGC TGCAATCATG
AGTACTGCAG ATTCTCAGTT ACTGGTTTCT TCATCTGCGC TTGCGGAAGA TTTATATAAG
CAACTTGTGA ATAAAGACGC AACGAGCAAA GACATTGTTA ATGTTGGCCG TTTTGCCGTT
ATTGCATTGT CTATTATTGC GTTAGCACTA GCCATGAACC CAGATAGCTC AGTGCTTGGT
TTGGTGTCTT ATGCATGGGC TGGTTTTGGT GCTGCGTTTG GTCCTGCGAT CATCCTAAGC
TTGTACTGGA AAGGCATGAA TCGTAATGGT GCGCTTGCTG GTATCGTTAT TGGTGGTTTA
ACGATTGTTG TCTGGAAACA GTTAACGGGT GGCTTGTTTG ATATCTACGA AATCGTTCCT
GGGATTATCT TTGCAACGAC AGCAATTATT GTTGTTAGCA AACTAACGGG TGAACCTGAA
GAAAAAGTTC GTAAACAACA CGAACAATTT GAACGTAACC TTGTTGAGTT TGACTAA
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| Protein sequence | MIENNFAITG TFLTYLVVML AIGIYAYKRT NNSSDYFLGG RTLGPWPAAL SAGASDMSGW
LLLGLPGYAY AAGLESLWLA GGLLLGTWLN WLICAKRLRT YSITTDDALT LPEYLSRRFN
DNSKLIQTIS ALFILLFFLF YTSSGLVAGG KLFETVFGLD YKVAVVIGTL CVVSYTLFGG
FLAVAWTDLV QGLLMSAALM IVPIAAMQGG FSQLNTDLVA INPELLTLWT GMDGNPLSAV
AIISLAAWGL GYFGQPHILA RFLASRSNKD LTTARRIAVI WTALSMAGAV LVGLVGLLYV
NGEMAGQVID GEKVFMLLVN AIFHPAIAGI LLAAILAAIM STADSQLLVS SSALAEDLYK
QLVNKDATSK DIVNVGRFAV IALSIIALAL AMNPDSSVLG LVSYAWAGFG AAFGPAIILS
LYWKGMNRNG ALAGIVIGGL TIVVWKQLTG GLFDIYEIVP GIIFATTAII VVSKLTGEPE
EKVRKQHEQF ERNLVEFD
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