| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0813 |
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| Symbol | |
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| ID | 6962162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 891039 |
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| End bp | 892418 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643382080 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_002265119 |
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| Protein GI | 209809580 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.908317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT TACTGATCAC CCCCCATTTT CGTAGTGAAG GGGATGTAAA TACGACTCTA
GCTCGCAGTC TGTGGAATGA ATCACTGCAA GATGAATCAA CCCAATCCTT ATTAACTCGC
GATTCGAACG TGTTTTTACA TCAAGCCATG TCGACCCCCT GTTTAGATTC TCTACAAGGG
GCGGAAGGGG TTTATTTACA AGACACGAGA GGGAAAAAAT ACCTCGATTT TCACGGTAAC
AACGTTCATC AGCTTGGCTA TGGTCATCCT CATGTCATAA AAAAAGTGAC CGAGCAAATC
GCAAAATTGC CTTTTTCACC AAGACGCTTT ACTAACTCAA TAGCGATTGA GTGTGCCGAA
AAACTCACCG AGATCTGTGG CGGTGAGCTT AATAGAGTCT TATTTGCACC CGGTGGTACT
TCCATCATTG GCATGGCCTT AAAACTGGCT CGTCACATTA CGGGCAACTT TAAAGTTGTT
TCATTGTGGG ATTCCTTTCA CGGAGCTTCT TTAGACGCAA TTTCTGTGGG CGGTGAAGCC
TGTTTTCGTG AAGGAATGGG GCCATTATTA GCAGGCGTAG AACGTATCCC TCCGGCGGTC
ACTTATCGTG GTGCCTTTCC ATCTTCAGAT GGCAGCGATG TTCATTACGC TGATTATTTA
GAATATGTCA TCGAAAAAGA AGGCGGCATC GGCGTGTTTA TTGCTGAAGC CGTTCGAAAT
ACCGATGTGC AAGTGCCGAG TAAAGCGTAT TGGAAGCGTA TTCGAGAAAT TTGCGATAAA
CACAATGTGC TATTAATTAT CGACGATATT CCAAATGGTA TGGGTCGGAG TGGTGAATGG
TTTACGCACC AAGCCTACGA CATTGAACCT GACATTTTAT GTATCGGTAA AGGATTAGGC
GGAGGATTAA TCCCTATTGC CGCCATGATC ACAAAAGACA AATACAATAC CGCGGCGAAC
GTCTCTTTGG GTCATTACAC TCATGAGAAA AGCCCTGTGG GTTGCGCTGC GGCACTCGCG
GTAATGGAAA CAATTGAACA AAACAACTTG CTTGAAAAAG TTCGCCACGA CGGTCAATTC
ATCCATCATT ATCTCAACAC AATGAAAGCA AAGTATCAAG TTATCGGCGA TGTTCGCGGT
ATTGGGTTGC TTTGGGGGGT TGAGTTAGTA ACCAGCCCTA TAACAAAAAC ACGCGCCTTT
GATGAAGCCG AAGCCGTGTT GTATCAATGT TTAAATGATG GCCTGAGCTT TAAAGTATCG
CAAGGCAACG TCATTCAACT CAGTCCACCA CTCATTATTT CTCGTGAAGA GCTAACGCAA
GCTCTGATTA TTTTTGAACA AGCAATTGCC AAAGTATGTA AGGATTTCAA CTATGTCTAA
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| Protein sequence | MSELLITPHF RSEGDVNTTL ARSLWNESLQ DESTQSLLTR DSNVFLHQAM STPCLDSLQG
AEGVYLQDTR GKKYLDFHGN NVHQLGYGHP HVIKKVTEQI AKLPFSPRRF TNSIAIECAE
KLTEICGGEL NRVLFAPGGT SIIGMALKLA RHITGNFKVV SLWDSFHGAS LDAISVGGEA
CFREGMGPLL AGVERIPPAV TYRGAFPSSD GSDVHYADYL EYVIEKEGGI GVFIAEAVRN
TDVQVPSKAY WKRIREICDK HNVLLIIDDI PNGMGRSGEW FTHQAYDIEP DILCIGKGLG
GGLIPIAAMI TKDKYNTAAN VSLGHYTHEK SPVGCAAALA VMETIEQNNL LEKVRHDGQF
IHHYLNTMKA KYQVIGDVRG IGLLWGVELV TSPITKTRAF DEAEAVLYQC LNDGLSFKVS
QGNVIQLSPP LIISREELTQ ALIIFEQAIA KVCKDFNYV
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