Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0796 |
Symbol | |
ID | 6962145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 872563 |
End bp | 873129 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643382065 |
Product | hypothetical protein |
Protein accession | YP_002265104 |
Protein GI | 209809565 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTCTATTAAT AATCGTAATC ATATTCGTTG GTTTCGGAGC AAAACAAGCT TATTTGGCGT ATTCAACTAA CGATAACGTA CTGTACGGAA TAGAAAATAA ACCCGTTGAT CTTTTTGATC TCAACGATCC CCGTATTCGT ATCGTCTATT TTGGTTTCAC TCGCTGCCCT GATGTCTGCC CTACCTCATT AGCGATGCTC TCTGGCGCAT TAAATCAAAT CGATCCAGGA ACATTAAAAA CGTTAAGACC TGTCTTTGTG ACTCTTGATC CAGAAAGAGA CAGTCCTGAA CACTCAGCAG AATACGCACA CTATTTTCAT TCTTCGATTG AGGGCGTTTC AGGATCAGTC GATGCAATCA ATGAATTAGC AAGACGCTAC AGTGTCACCT TTCATAAGAC CGAATTAAAA GACTCAGCAT TAAAATATAC GATTGATCAC TCCTCATATT TCTACTTTCT AAAACCAGAT GGTTCATTAA TACGTAAAGT GCCTCACACT ATATCGCCAG ATCCCATAGT GGAAGCGATT CAATCTCTTT CATTGCCAGC AAACTAA
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Protein sequence | MKKILLIIVI IFVGFGAKQA YLAYSTNDNV LYGIENKPVD LFDLNDPRIR IVYFGFTRCP DVCPTSLAML SGALNQIDPG TLKTLRPVFV TLDPERDSPE HSAEYAHYFH SSIEGVSGSV DAINELARRY SVTFHKTELK DSALKYTIDH SSYFYFLKPD GSLIRKVPHT ISPDPIVEAI QSLSLPAN
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