Gene VSAL_II0794 details

Gene Information

• Locus tag: VSAL_II0794
• Symbol: tag
• ID: 6962144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 871445
• End bp: 872005
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643382063
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_002265102
• Protein GI: 209809563
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA AACGTTGCCA GTGGGCTGAA GTTTCTGATT TAGATAGAGA ATATCATGAT 
AATGAATGGG GGGTTCCTGT TCACTCTGAT CAACAATTGT TTGAATCTTT AATTTTAGAA 
GGTGCGCAAG CGGGATTAAG TTGGTCTACT ATTTTAAAAA AACGGGAAGG CTACCGTTTG 
CTGTTTGATG GTTTTGATGT TCAAAAAATC GTTAAATATG ATCAAGATAA AGTCGACGCG 
TTAATGCTAG ACGCTCGTAT TGTTCGTCAT CGCTTAAAAA TTAATTCGGT GATCACCAAT 
GCTCAGGCCT TTATTAAGAT ACAGCAAGAG TTTGGCAGTT TTTCTGACTA TTTGTGGTCT 
TATGTTGATG GCAAACCAAT GATAAATAAG TGGGAAACAA TGGCTGATGT GCCAGTCACC 
ACTGAGTTAT CTGATAAATT AAGTAAAGAT CTAAAGAAAC GTGGTTTTAA ATTTATTGGT 
TCGACCATCT GTTACGCTTT TTTACAGGCG ACGGGCGTAA TCGATGATCA TCTTGTCAGT 
TGCCCTTGCT ACAAAGGTTA A 

 

Protein sequence

MDKKRCQWAE VSDLDREYHD NEWGVPVHSD QQLFESLILE GAQAGLSWST ILKKREGYRL 
LFDGFDVQKI VKYDQDKVDA LMLDARIVRH RLKINSVITN AQAFIKIQQE FGSFSDYLWS 
YVDGKPMINK WETMADVPVT TELSDKLSKD LKKRGFKFIG STICYAFLQA TGVIDDHLVS 
CPCYKG