Gene VSAL_II0788 details

Gene Information

• Locus tag: VSAL_II0788
• ID: 6962140
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 865346
• End bp: 866014
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643382057
• Product: putative lipoprotein
• Protein accession: YP_002265096
• Protein GI: 209809557
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4067] Uncharacterized protein conserved in archaea

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAA CAAAAAAATG GTCAACGTTA CTTTTACCTA TTTTACTTGC TGGTTGTATG 
TCGACAACAG CAACGACAAC ACCAGAAACA GGTACGACTG ATAAGCCGGT TGTTGAGCAA 
CCAGTAACAC CAGAGACTAA GCCAGCAGTA AAACCAGAAA CAAAGCCAGC AGTTAGGCCT 
GAACAAAAAC CACAGATCGA TCCTAAGCCA CCCGTTGCGA CAAATCTGAA AACAGCAGAT 
GGCAAACTGA TTTTAGGTGA AGAAGAGTGG ATGTACATCA AAGGGATTAA CCATAACGCG 
AAAGCTCGCA TTGACACAGG CGCTACAACG TCTTCAATTT CAGCGGTTGA TATTGAAATG 
TTTGAGCGTG ATGGAAAAGA TTGGGTTAAA TTTAAACTTG CTCATGGTGC TGGTGAGACA 
AAAGAGTTTG AATCACCAGT GGCTCGTATC GTAACTATTC GTCAATCAAG TACAGAGAAA 
CGAACTGATC GTCCAGTGAT TGAAGCATGG GTACAAATTG GCGATTTAGA AACCAAGACA 
GAGTTTACTC TTAATGACCG TACGCACATG ACGTTCCCTG TATTATTAGG TCGAACTTTC 
TTCCGTGATG TGGCTGTTGT TGACGTAAGT AAAAAGTTCA TTCAGCCAAA AGTAAAATTA 
GCTAAGTAA 

 

Protein sequence

MKITKKWSTL LLPILLAGCM STTATTTPET GTTDKPVVEQ PVTPETKPAV KPETKPAVRP 
EQKPQIDPKP PVATNLKTAD GKLILGEEEW MYIKGINHNA KARIDTGATT SSISAVDIEM 
FERDGKDWVK FKLAHGAGET KEFESPVARI VTIRQSSTEK RTDRPVIEAW VQIGDLETKT 
EFTLNDRTHM TFPVLLGRTF FRDVAVVDVS KKFIQPKVKL AK