| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0787 |
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| Symbol | |
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| ID | 6962139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 863816 |
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| End bp | 865234 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382056 |
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| Product | putative transglycosylase protein |
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| Protein accession | YP_002265095 |
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| Protein GI | 209809556 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGTT TACGTAGATT TATATGGGTA TTATTATTTA TACCCCAACT GGCTTTTTCT
ATTGAGTTAT CCCCCATGAC TCAAACTCCT TATGTTGGGG ATTTAAAAGT ATTAGAAAAA
AAAGGCACCA TTAGGGTACT TGTCTCTGCC GATCTTGGAT TTTATTACAT AGAAAAGGGA
CAACCTAAAG GCATTATTGC TGAATTCCTC CATCACTTTG AACTCCATTT ACGAAAAAAT
AATATCAACG TGAATGTCCA AGTGATCCCT ATTCCTAGAG ACGATTTATT CAATGCGTTA
GAAAGTGGGT TTGGCGATCT TGCCGTTGCC AATTTAACGA TCACACCTCA ACGTTTAAAA
TCGGTTGATT TCAGTGATCC TGTTATTAGC AACAGTAAAG AATGGTTAGT CGGTTCAAAA
AGTGCGCCTG CCATTACCTC TTTTGAAGAT CTCTCAGGCA AAGAAGTATG GGTTAGACCA
AGCTCTAGCT ACTTTGAAAG TTTACAAAGA ATCAATAAGC AACTTTCAGC ACAAGATATT
CCACCTATCA GTGTTCAATT CCTAGAAGAA AACCTACAAG ATTACGAACT GATGGAGATG
CTTAACCAAG ATATATTACC TATCACGGTG ATTGACAGCC ATAAATCACA ATTATGGACT
AAGGTAATGA AAAACATCAC TATCTATGAA GATCTTCCAA TCAGAACAAA TGCAAATATT
GGCTGGGCAA TGCGCCAAAA TAGCCCCCAA TTAAAATCTG CTGTAAACAA ATACGTAAGA
ACCATTCGTC AAGGTTCCTT CTTAGGTAAC GTCATTTACA AGAAATACCT TGATAATACC
AAGTGGCTAA AAAAAGCCCT TAACCCTGAA ACCGTAACGC AATTTAAAAG TTTGGCGGTC
TTGTTTGAAC AATACGCCGA CAAGTATGAA TTTGATTGGT TAATGATCTC AGCTCAAGCG
TATCAAGAAT CCAAGTTCAA TAACCGCCTC GTTTCTCATA TGGGTGCCGT TGGTATTATG
CAAGTACTGC CACAAACCGC AAAAGAACCG TATATCAATA TCAAAAAATT TAGACAACTA
GAACATAATA TTCACGCAGG TGTGAAATAC ATGAGTTTTG TACATAAACG CTATTTTTTG
AAACCGGAGA TCACTGAAGA AAATCAAATG TACTTTTCAT TAGCGGCTTA CAATGCAGGA
CCTGCGAATG TAAGAAAAAT GCGAAGAATG GCGGTTAAAC ACGGGTATAA CCCTAATGTT
TGGTTTAATA ATGTAGAAAT CATGGCTCAG AAATACGTTA GCAAAGAGCC TGTTCATTAT
GTTGCCAATA TCAGCCGTTA TTACGTTATC TACAAACAAA TATATAAGCT ACAAGCCCAT
AGAGAGCAGC AGAATGCATC TAATTATAAG TTGTTCTAA
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| Protein sequence | MDSLRRFIWV LLFIPQLAFS IELSPMTQTP YVGDLKVLEK KGTIRVLVSA DLGFYYIEKG
QPKGIIAEFL HHFELHLRKN NINVNVQVIP IPRDDLFNAL ESGFGDLAVA NLTITPQRLK
SVDFSDPVIS NSKEWLVGSK SAPAITSFED LSGKEVWVRP SSSYFESLQR INKQLSAQDI
PPISVQFLEE NLQDYELMEM LNQDILPITV IDSHKSQLWT KVMKNITIYE DLPIRTNANI
GWAMRQNSPQ LKSAVNKYVR TIRQGSFLGN VIYKKYLDNT KWLKKALNPE TVTQFKSLAV
LFEQYADKYE FDWLMISAQA YQESKFNNRL VSHMGAVGIM QVLPQTAKEP YINIKKFRQL
EHNIHAGVKY MSFVHKRYFL KPEITEENQM YFSLAAYNAG PANVRKMRRM AVKHGYNPNV
WFNNVEIMAQ KYVSKEPVHY VANISRYYVI YKQIYKLQAH REQQNASNYK LF
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