| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0786 |
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| Symbol | |
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| ID | 6962138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 862397 |
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| End bp | 863698 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643382055 |
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| Product | transglycosylase protein |
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| Protein accession | YP_002265094 |
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| Protein GI | 209809555 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTAGTCATTC GGATATTAGT CTCTGTTGAA GTTGGTTTTT ACCAAGTCAG TGATGGTAAG
CCGATTGGCA TTATTTCGGA ATTTCTTTCG CACTTTGAAC AAGCATTAAA AAAACAAAAT
CGTCACATGC GCATACGCAT TATCCCAGTC GCTCAAGATG ATCTGATCCG CTCTCTTGAA
TCCGGTATTG GAGACATTGC TGTTGGGCAC TTAGCGGTGA CCAAAAATCG CCTAAAGCAT
ATTGATTTCA GTACTCCCAC CATTAAAGAC AGTGCCGAAT GGCTTATCAC TTCAAAAGAA
GAAGCGCCTA TTGAAACCAT TTATGATCTT TCAGGAAGAG AGATCTGGGT AAAAGGCAGT
TCCAGTTATT TTGAAACCCT ACAAAATCTA AATAACCAAT TAGCCAGAGA GCATTATTCT
CCAATGGATG TTCATTTTTT AGAAGAGTCT CTTGGAGAGA ATGAAATACT CGAAATGGTA
GAAAATAAAT TGCTTCCTGC CACCGTTATT GAAAATTATC GAGCACTGTT ATGGAAAAAG
ATCATTCCTA ACATTCAATA CCATGATGAA TTTCCCCTAA AAGAAGACAT CAATATTGCA
TGGGCAATGC GAAAAGACAG CCCACAGCTG TCAAAAGTAG TGAATCAATA CATTACAAAA
ATCAAAAAAG GCTCATTCTT AGGGAATCTT ATTTATAAAA AATACCTTAA TGATAATGAT
GACCGATGGT TAGCAAAAAT CTTACGATCT GACAGTATCG ATAGACTAAA CCAGTTTTCA
GGATTATTTA AACAATATTC AGACATGTAC AATCTCGACT GGTTATTAAC TTCGGCGCTT
GCCTACCAAG AATCAAGATT AAACAACAAT GTCATCTCTC ATAAAGGTGC GGTTGGTATT
ATGCAAGTGT TGCCAACAAC GGCACAAGAT CGCAATGTTC GCATTAATGA TATCAATCTA
TTAGAAAATA ACATTCACGC AGGGATAAAA TACCTTAGCT TTGTGCATAA ACGCTATTTT
GATAAGCCTG AAATTTCCCC TGATAATCAA CTCTATTTTT CTCTTGCGGC TTATAATGCA
GGACCTGCAA ACATAAGGCG CATTAGAAAC ATGGCTAGAA TAAATGGATA TAATCCAAAT
ATTTGGTTCA ATAACGTTGA ATTAATGGCA ATAAAATACA TCAGTAAAGA GCCCGTGCAC
TATGTGTCAA ACATCAGCCG TTATTACGTC ATTTATAAGC AAATAACACA ATTAGAAGAA
CATAAAAAAC AGCGTAATGT GTCGACCTCT TCTTTCTTTT AA
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| Protein sequence | MVIRILVSVE VGFYQVSDGK PIGIISEFLS HFEQALKKQN RHMRIRIIPV AQDDLIRSLE
SGIGDIAVGH LAVTKNRLKH IDFSTPTIKD SAEWLITSKE EAPIETIYDL SGREIWVKGS
SSYFETLQNL NNQLAREHYS PMDVHFLEES LGENEILEMV ENKLLPATVI ENYRALLWKK
IIPNIQYHDE FPLKEDINIA WAMRKDSPQL SKVVNQYITK IKKGSFLGNL IYKKYLNDND
DRWLAKILRS DSIDRLNQFS GLFKQYSDMY NLDWLLTSAL AYQESRLNNN VISHKGAVGI
MQVLPTTAQD RNVRINDINL LENNIHAGIK YLSFVHKRYF DKPEISPDNQ LYFSLAAYNA
GPANIRRIRN MARINGYNPN IWFNNVELMA IKYISKEPVH YVSNISRYYV IYKQITQLEE
HKKQRNVSTS SFF
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