| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0772 |
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| Symbol | torA |
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| ID | 6962129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 849629 |
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| End bp | 852091 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643382041 |
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| Product | trimethylamine-N-oxide reductase precursor |
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| Protein accession | YP_002265080 |
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| Protein GI | 209809541 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATTA GCAGAAGAAG TTTTCTAAAA GGTGTTGCAA CAACAAGTGC AGTATCTTTA
GTAGGTCCTA GCCTACTAAT GTCTTCAAAA GTAAGCGCGG CTGAAACGAC TGGCACATGG
CGTACATCTG GCTCGCATTG GGGTGCATTC CGTGCACACA TCTATGCGGG TAAAGTACAA
GAAATTAAAG CACTAGAGAT GGATAAACAT CCAACAGATA TGTTGAATGG CATCAAAGGT
ATTATCTACA GCCCAAGCCG TGTACGTTAC CCAATGGTTC GTGTTGATTG GCTGAAGAAA
CACAAATACT CGGCTGAAAC TCGTGGTAAT AACCGTTTCA TCCGTGTGAC TTGGGATGAA
GCGCTAGATT TATTCTACCG TGAGCTTGAG CGTGTTCAAA AAGATTACGG TCCATGGGCG
TTGCATGCAG GTCAAACTGG TTGGAACCAA ACAGGTTCTT TCCATAACTG TACTGCTCAA
ATGCAACGTG CTGTTGGTAT GCATGGTAAC TTCATCAAGA AAGTAGGTGA CTACTCGACG
GGTGCTGGCC AAACAATCAT GCCGTATGTT CTAGGTTCAA CAGAAGTATA CGCACAGGGT
ACTTCTTGGT CTGAAATCCT AGAGCACAGT GATAACATTA TTCTTTGGGC GACCGATCCA
GTTAAAAACC TACAAGTAGG TTGGAACTGT GAAACGCACG AAGCATTTGC TTACCTTGAT
CAGCTAAAAG AAAAAGTAGC TGATGGTAAG ATCAATGTGA TCTCTGTTGA CCCAGTTAAA
AACAAAACTC AGCGTTTCTT AGACAATGAG CACATGTACA TTAATCCACA ATCAGATGTG
GCGTTCATGC TTGCTGTTGC TTATACGCTA TACACTGAGA ATTTATATGA TAAGCAATTC
ATCGATACTT ACTGCTTAGG TTTTGATGAG TTCATGCAAT ACGTGCTTGG TGAAACGAAA
GATAAAGTCG TTAAAACACC TGAATGGGCA TCTGATATCT GTGGTTTGTC TCCAGAGCGT
ATTCGTGAAT TTGCGAAAAT GATGGCGACA GGTCGTACAC AAATCTTATT TGGATGGTGT
ATCCAACGTC AACAACACGG TGAGCAACCA TACTGGATGG GTACGGTTCT ATCTGCAATG
ACAGGTCAAA TCGGTCTTGC AGGTGGCGGT GTGTCTTACA GTCACCACTA TTCAAGTGTT
GGTGTTCCTT CTACTGGTTT TGCTGGCCCT GGTGGTTTCC CACGTAACGT GGATCAAGGT
AACAAGCCTA AGTGGGATAA CAATGACTTT AATGGTTACA GCAATACGAT CCCAGTAGCT
CGTTGGATTG ACTGTCTATT AGAACCAGGT AAAGAAATCC GTTATAACGG TAATAAAGTG
ATATTACCTG ATTTCAAAAT GATGGTTATT TCTGGTAACA ACCCTTGGCA TCACCACCAA
GATCGTAACC GTATGAAGAA AGCATTCCAA AAACTTCAAA CGGTTGTAAC GATTGATTTC
ACATGGACAG CAACGTGTCG TTTCTCTGAC ATAGTGCTTC CTGCATGTAC GCAATGGGAA
CGTAACGATA TTGACCAATA CGGTTCATAC TCTGCTCGTG GTCTTGTTGC AATGCATAAA
TTGGTTGATC CATTATTCCA ATCACGATCT GATTTTGAGA TCATGACTGA ACTAACACGC
CGTTTTGGTC GCCATAAAGA ATACACTCGT GATATGGATG AGATGGAGTG GGTTCGTTCA
CTTTACGCTG AGTGCCGTAC TGCGAATGAA GGCAAATTTG ATATGCCTGA GTTTGATGTA
TTCTGGGAAA AAGGTGTTCT TGACTTTGGT GAAGGTAAAC CATGGGTTCG CCACGCTGAT
TTCCGTAAAG ATCCTGAAGT GAATGCATTA GGCACACCTT CTGGTTTCAT TGAAATCACA
AGTCGTAAGA TTGCTCGTTT TGGCTACGAA GAATGTCAAG GTCACCCAAT GTGGTTCGAG
AAATCTGAAC GCTCACACGG TGGTCCTGGC TCTAAGAAAC ACCCATTCTG GATGCAGTCT
TGTCACCCTG ATAAGCGTTT GCACTCACAA ATGTGTGATT CTGAAGAATT CCGCGCCACT
TACACAGTAC AAGGTCGTGA GCCTGTATAC CTAAACCCAC AAGATGCTAA AGCAAAAGGC
ATCAAAGATG GTGATTTAGT TCGTGTATTT AATGACCGTG GTCAGCTTCT TGCTGGTGCT
GTTCTTACTG ATAGCTATCC TAGCGGCGTT ATTCGTATTG AAGAAGGTGC ATGGTACGGC
CCTCTAAATG AAAAAGTTGG CGCTATCTGT ACTTACGGCG ATCCAAACAC CTTAACGCAA
GATATCGCAT CATCTGAGCT TGCTCAGGCG ACATCTGCGA ACACATGTTT GGTAGATTAC
GAGAAGTTTA CAGGTAAAGT TCCACCAGTA ACCTCGTTCG GTGGTCCAAT TATTGTTGAA
TAA
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| Protein sequence | MSISRRSFLK GVATTSAVSL VGPSLLMSSK VSAAETTGTW RTSGSHWGAF RAHIYAGKVQ
EIKALEMDKH PTDMLNGIKG IIYSPSRVRY PMVRVDWLKK HKYSAETRGN NRFIRVTWDE
ALDLFYRELE RVQKDYGPWA LHAGQTGWNQ TGSFHNCTAQ MQRAVGMHGN FIKKVGDYST
GAGQTIMPYV LGSTEVYAQG TSWSEILEHS DNIILWATDP VKNLQVGWNC ETHEAFAYLD
QLKEKVADGK INVISVDPVK NKTQRFLDNE HMYINPQSDV AFMLAVAYTL YTENLYDKQF
IDTYCLGFDE FMQYVLGETK DKVVKTPEWA SDICGLSPER IREFAKMMAT GRTQILFGWC
IQRQQHGEQP YWMGTVLSAM TGQIGLAGGG VSYSHHYSSV GVPSTGFAGP GGFPRNVDQG
NKPKWDNNDF NGYSNTIPVA RWIDCLLEPG KEIRYNGNKV ILPDFKMMVI SGNNPWHHHQ
DRNRMKKAFQ KLQTVVTIDF TWTATCRFSD IVLPACTQWE RNDIDQYGSY SARGLVAMHK
LVDPLFQSRS DFEIMTELTR RFGRHKEYTR DMDEMEWVRS LYAECRTANE GKFDMPEFDV
FWEKGVLDFG EGKPWVRHAD FRKDPEVNAL GTPSGFIEIT SRKIARFGYE ECQGHPMWFE
KSERSHGGPG SKKHPFWMQS CHPDKRLHSQ MCDSEEFRAT YTVQGREPVY LNPQDAKAKG
IKDGDLVRVF NDRGQLLAGA VLTDSYPSGV IRIEEGAWYG PLNEKVGAIC TYGDPNTLTQ
DIASSELAQA TSANTCLVDY EKFTGKVPPV TSFGGPIIVE
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