Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0742 |
Symbol | |
ID | 6962101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 816531 |
End bp | 817196 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643382016 |
Product | putative HNH endonuclease |
Protein accession | YP_002265054 |
Protein GI | 209809516 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02646] conserved hypothetical protein TIGR02646 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTAATG TTACTAGATT GGCGGAAGTG CCAGAATGCT TATCACGCGG TAATCAATAT AATCATCAAC AAGTTGTTAG CTCCTTAAAA ACAATGTTTT TTGAAAAATG TTACTTATGT GAACGAAACG ATATTCAAGA TGTTGAAGTA GAACATTTTA ACCCTCAGCA AGCAGGTGGT GGACGAACAG ATTGGAATAA TCTTTATTAC TCATGCAGTC GTTGTAATAG CTTAAAAAGT AATACTCATA CCAAATTATT AGATTGCACA GATGCAAATA TTGATATATT TCGTAAAATT CGATTAGTGA TGACAGTAGC TCCAGACGAT GATGTGCTAG TTGAAGCGAC CGATAAAAAC CCTTGTGAAC AAACACAAAA TACGGTGCGG CTCCTAAATG AATGTTATAA CAGTACAAAT ACTGCTTTAC GTGGTGTTAG TCGAGAGGCA TTAATTGAGC AAATATACGA ATATATGATT GCATTTATGA ATGCGCGGAA TTTGTTAAAA AAACCGTCTA CGGGTAGGAC AATTAAACAA GGAGCAATGG AAACAATCGA AGCAATGTTA AATGTTACGC ATCCATTTAG TGCATTCTGG CGTTGGCAAT ATTTGCATGA CAGTTTTCTA ACAGAACATT ATTCAAACCT TGAAAATGGT TTTTAA
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Protein sequence | MFNVTRLAEV PECLSRGNQY NHQQVVSSLK TMFFEKCYLC ERNDIQDVEV EHFNPQQAGG GRTDWNNLYY SCSRCNSLKS NTHTKLLDCT DANIDIFRKI RLVMTVAPDD DVLVEATDKN PCEQTQNTVR LLNECYNSTN TALRGVSREA LIEQIYEYMI AFMNARNLLK KPSTGRTIKQ GAMETIEAML NVTHPFSAFW RWQYLHDSFL TEHYSNLENG F
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