| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0738 |
|---|
| Symbol | ppaC |
|---|
| ID | 6962098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 814198 |
|---|
| End bp | 815118 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643382012 |
|---|
| Product | putative manganese-dependent inorganic pyrophosphatase |
|---|
| Protein accession | YP_002265050 |
|---|
| Protein GI | 209809512 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGT ATGTAGTGGG TCATAAAATT CCAGATTCAG ATTCAATTTG TGGTGCAATC
GCACTTGCTT ATTTAAAAAA TCAAATTGGC GAAGCAGCTA TTCCTGCTCG CTTAGGTGAA
CTTTCTCCTG AAACAGCATT CATCCTTGAT AAGTTTGGTT TAGAGTCTCC AGAGTTTAAA
ACTAGCTATG CTGGTGAAGA AGTTTATATT GTCGATCATT CAGAATTAAC TCAAGCACCT
GATGATATTG CAGAAGCAAC CATTGTAGGT ATTGTTGATC ATCATAAATT AGGAGATTTA
ACAACATCTA CACCTTTAGA GTGTTGGATT CGTCCTGTTG GTTGTAGTAA TACAATTATC
AAGATGATGT ATGATTTTTA TCAAGTTGAG ATCCCTCAGA ATATTGCTGG CATTATGTTG
TGTGCAATCT TGAGTGATAC TGTTATTTTT AAATCACCAA CATGCACAAC CGCTGATATT
AAATGTGTTG AAGCATTAGC TGAAATCGCT GGTATTGAAG ATTTTAAAGC ATTAGGCATG
GAAATGTTTA AGGTGAAATC GGCAGTTGAA GGTACACCTG TACGTGATCT TGTTATGCGA
GACTTTAAAG ATTTCAATAT GAATGGTGAG CTTGTTGGTA TTGGTCAACT TGAAGTTATC
GATCTTTCAG TATTTGATGA TATTAAAGAA GAACTAGAAG CGGATATTGC AGTGATGAAA
GTTGAGGGTA ATCGTCATAC GATGATTCTA CTTTTGACTG ATATCATGAA AGAAGGTTCT
GAATTATTAG TAATCAGTGA TAATGAAGAA CTAACAGCAA AAGCTTACGG TAAAGTTACT
GAAAATGGAC GAGTATGGCT TGATGGTGTT CTTAGCCGTA AGAAGCAAAT CGTTCCTCAA
TTGCAAGAAG TTTTCGCATA A
|
|---|
| Protein sequence | MSMYVVGHKI PDSDSICGAI ALAYLKNQIG EAAIPARLGE LSPETAFILD KFGLESPEFK
TSYAGEEVYI VDHSELTQAP DDIAEATIVG IVDHHKLGDL TTSTPLECWI RPVGCSNTII
KMMYDFYQVE IPQNIAGIML CAILSDTVIF KSPTCTTADI KCVEALAEIA GIEDFKALGM
EMFKVKSAVE GTPVRDLVMR DFKDFNMNGE LVGIGQLEVI DLSVFDDIKE ELEADIAVMK
VEGNRHTMIL LLTDIMKEGS ELLVISDNEE LTAKAYGKVT ENGRVWLDGV LSRKKQIVPQ
LQEVFA
|
|---|
| |