Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0730 |
Symbol | |
ID | 6962539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 805302 |
End bp | 806081 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643382004 |
Product | putative metallothionein SmtA |
Protein accession | YP_002265042 |
Protein GI | 209809504 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0631637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATAAAG ACCGTAATTT CGATGATATC GCCCATAAAT TTGCAAAGAA CATTTATGGT TCTGACAAAG GCGAGATCCG TCAAACTATT GTATGGCAAG ATATGGAAAC CATCTTAGCT GAAACTAAAG CAAATTCTAA GCCACTTATT GTTTTAGATG CTGGTGGAGG AATAGGCCAA ATATCGCAAT TAATAGCGAA GCAGGGTCAT ACAGTGACTT TGTGTGATAT ATCTTCAGAA ATGCTAACAT TAGCGAAAGA GGCGGTCGAA GATAATGGTT TATCGTCTCA GTATCAATTT ATTCATTCGG CAGTACAAGA AATTGAACAG CATAAAGTTG GTAAGGTTGA TATTCTACTT TTCCATGCAG TGATGGAATG GCTAGATGAT CCGAAAACAG CATTGGATAT TTTATTGAAA CAAGTTAAAT CTGGTGGGTA TGCTTCTATT ATGTTTTATA ATCACCATGG TTTAGTATTG AAAAATGTGA TTTGTGGCAA TATTCCTCAT GTTTTAGATG GCATGCCACA TCGAAAACGG TTTAAGTTAC AACCACAAAA AGGGTTGATG CCACATGATG TTTATCAGTG GATTGAAGAT TCTGGGTATG AAATAAAGGG AAAATCGGGT ATTCGCTCTT TTCATGATTA CATCGGTAAC ATGGAATACA TGGGGAATTA CCAAATCGAA GACGTGCTGA AGCTAGAAAA ACAGTTATGC CGTCAAGAAC CTTATCTGTC TCTTGGTCGT TATATTCACG TATGGGCGAA GAGAAAATAA
|
Protein sequence | MNKDRNFDDI AHKFAKNIYG SDKGEIRQTI VWQDMETILA ETKANSKPLI VLDAGGGIGQ ISQLIAKQGH TVTLCDISSE MLTLAKEAVE DNGLSSQYQF IHSAVQEIEQ HKVGKVDILL FHAVMEWLDD PKTALDILLK QVKSGGYASI MFYNHHGLVL KNVICGNIPH VLDGMPHRKR FKLQPQKGLM PHDVYQWIED SGYEIKGKSG IRSFHDYIGN MEYMGNYQIE DVLKLEKQLC RQEPYLSLGR YIHVWAKRK
|
| |