| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0723 |
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| Symbol | |
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| ID | 6962089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 795578 |
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| End bp | 796255 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381998 |
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| Product | transcriptional regulator, response regulator |
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| Protein accession | YP_002265036 |
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| Protein GI | 209809498 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAC TGGTTATAGA GGACGATCAA ACCACTCGCG AATTTATCGC AAAAGCGCTT
GAACAAGAAG GGTTTATCGT TGATAACTCA GGAGATGGAA AAGAAGGCTT AATGATGGCC
ATCAGCTGTG AATACCAATT AATAGTATTG GATCGTATGT TACCCAATAT TGATGGTTTA
AAAATCCTCT CTGCGATCCG AGCAACAGGA AATAATACCC CAGTACTGAT ACTTAGCGCG
TTAGACAGCG TAGACCAACG AGTTGAAGGC TTAATTGCAG GCAGTGATGA TTATCTAACT
AAGCCTTTTG CCTTAGCGGA ATTATTAGCC CGAATTAATA TCATTCTCCG TCGCAATCGA
CCAATCGAAA GTTTCTCTAA TGAGATAAAA ATCAACAATC TCCTCATTAA TTTGCGGTCT
CAAAAAGTCA CCATAAATAA CAACGCCATC TCTCTACAAA ATAAAGAGTT TATCTTATTA
CGTTACTTAG CAGAGCACGT GAACGAAGTT GTCTCTCGCA TGCGTTTATT TGAAGCCGCA
TGGGATTATC ACTTTGATCC TAAAACTAAC GTTATTGATG TGCATATTGC TAAATTACGT
AAGAAACTAG AGCAAGGCGG AGCGATCAAT TTAATCGAAA CCGTTCGTGG AGCGGGTTAT
GTTATTAGAC AAGCGTGA
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| Protein sequence | MKILVIEDDQ TTREFIAKAL EQEGFIVDNS GDGKEGLMMA ISCEYQLIVL DRMLPNIDGL
KILSAIRATG NNTPVLILSA LDSVDQRVEG LIAGSDDYLT KPFALAELLA RINIILRRNR
PIESFSNEIK INNLLINLRS QKVTINNNAI SLQNKEFILL RYLAEHVNEV VSRMRLFEAA
WDYHFDPKTN VIDVHIAKLR KKLEQGGAIN LIETVRGAGY VIRQA
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