| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0713 |
|---|
| Symbol | |
|---|
| ID | 6962081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 782610 |
|---|
| End bp | 783182 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643381988 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002265026 |
|---|
| Protein GI | 209809488 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4454] Uncharacterized copper-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGA AAAAAACAGT ATTAGCAATA GCACTATCAT TGGTAGCGAG TTCTGCAATG
GCAGAAATGG ACCACAGTAA AATGGATCAC GGTTCAATGG ATATGAAAGG AATGGACATG
AGTAAGATGG ATCATTCCAA AATGAATATG AAAGACATGG ATATGAGCAA GATGGAAGGC
ATGTCTATGG ACGATATGAA TGCGGTAGGG ATGCCAGCAA CTGGCATGAA AGCAAATAAA
GTCGTTCATG TCATTTTATC TGACGATATG AAAATTACCT TTAAAAAAGA AGTCGATATT
GAACCTAATG ATATCGTTCA ATTTGTGATT ATGAATACAG GTAAAATCGA TCATGAGTTC
TCAATTGGTA ATGAAACCGA GCAATTAGAA CACCGTGAAA TGATGAAGAA AATGACATCA
GGTCATGCAC ATGACAGTGG TAGCACAGTC ACAGTTCAAC CAGGTAAGGC GAAGCAAATT
ACGTGGCATT TCCATGGTGA TAATCACGTA GAGTTTGCGT GTAATATTCC AGGGCATGCA
GAAGCAGGGA TGGTAAAGAA AATAACGTTA TAA
|
|---|
| Protein sequence | MKMKKTVLAI ALSLVASSAM AEMDHSKMDH GSMDMKGMDM SKMDHSKMNM KDMDMSKMEG
MSMDDMNAVG MPATGMKANK VVHVILSDDM KITFKKEVDI EPNDIVQFVI MNTGKIDHEF
SIGNETEQLE HREMMKKMTS GHAHDSGSTV TVQPGKAKQI TWHFHGDNHV EFACNIPGHA
EAGMVKKITL
|
|---|
| |