Gene VSAL_II0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0708 
SymbolhutH 
ID6962492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp775737 
End bp777269 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content45% 
IMG OID643381984 
Producthistidine ammonia-lyase 
Protein accessionYP_002265022 
Protein GI209809484 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.085386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTCAT TAGAAATTAT TCCAGGCAAG TTATCTCTAA AACAGTTACG TGAAGTTAGC 
CGTCACCCTA CTCAACTTTC ACTTCATCCA GACGCTTTAC CCGATATGAT CACCAGTGCC
GAGGTGGTGG CTCAAGTGAT CCGAGACGGT AAAACCGTTT ATGGCATTAA TACCGGGTTT
GGGTTGCTCG CCAATACCTG TATTGCAGAA GAAGATCTAG AAACACTGCA ACGCAGTATT
GTTCTGTCGC ATGCTGCGGG TATTGGTCAA TTCATGGACG ACGCAACCGT TCGGTTAATG
ATTGTCCTAA AAGTAAACAG CCTTTCTCGC GGATACTCAG GCATTCGTCC ACTGGTAGTA
AACGCATTAA TTCAATTAGT TAACTCTGAG GTGTATCCCT GCATTCCTAA AAAGGGGTCT
GTTGGTGCCT CTGGCGATCT TGCTCCTTTA GCTCACATGA GTACCGTTTT ATTGGGCGAA
GGTGAAGCCC GTTATAAAGG CGAAGTGATT TCAGGTCAAA GAGCCTTAGA AATCGCAAAG
TTAGATCCAA TAACACTCGC ACCAAAAGAA GGATTAGCGC TACTGAACGG AACTCAAGCC
TCTACTGCAT TTGCTCTAGA AGGTTTATTC GCTGCCGAAG ATTTATATGC TGCCGCAACG
GTCTGTGGTG CAATGACGGT TGAAGCCGCA TTAGGCAGCC GTAAACCGTT TGACTCAAGA
ATTCATCGTG TTCGTGGGCA TCGTAGTCAA ATGGACGCCG CATTAGGCTA TCGTCATTTA
TTAGCACAAA ACAGTGAAAT AGGCTTATCA CACCAATGCT GTGAACGAGT ACAAGATCCC
TATTCACTGC GTTGTCAGCC TCAAGTGATG GGCGCGTGTT TACAACAGAT CAGAAACTCT
GCCGATACAT TAGAGATAGA ATCAAACTCC GTATCGGACA ATCCTTTAGT ATTCGCAGAA
GATGGCGATA TTATCTCTGG CGGTAACTTT CATGCAGAGC CTATCGCAAT GGCTGCGGAT
AATCTAGCGT TAGCCATTGC AGAAATTGGC AGTTTGTCTG AACGTCGAAT GGCACTGCTT
ATTGACAGTG GATTAAGTAA ATTACCGCCA TTTTTAGTGG ATAACGGCGG AGTAAACTCA
GGTTTTATGA TCGCGCAAGT CACCGCAGCG GCATTAGCCA GTGAAAACAA AAGTCTTGCT
CACCCTGCTT CTGTTGATAG TTTACCAACG TCTGCAAACC AAGAAGATCA CGTATCAATG
GCAACCTTTG CAGCCCGTCG TTTAGGGGAT ATGGCCGAAA ATACACGCGG GATATTAGCC
GTCGAACTGC TCGCTTCGGC TCAAGGGTTA GATTTCAGAG CTCCAAACAA AAGCTCAGAA
AAAATAGAAC AAGCAAAAGC TATGCTGCGT GAACGTGTCG ATTTTTATGA CAAAGACCGT
TATTTCGCAC CAGACATTGC CAAAGCAAAC GCCCTATTGC TAGAGGCGAC ATACAATCAA
CTAATGCCTG AATCATTATT GCCAAGTATT TGA
 
Protein sequence
MYSLEIIPGK LSLKQLREVS RHPTQLSLHP DALPDMITSA EVVAQVIRDG KTVYGINTGF 
GLLANTCIAE EDLETLQRSI VLSHAAGIGQ FMDDATVRLM IVLKVNSLSR GYSGIRPLVV
NALIQLVNSE VYPCIPKKGS VGASGDLAPL AHMSTVLLGE GEARYKGEVI SGQRALEIAK
LDPITLAPKE GLALLNGTQA STAFALEGLF AAEDLYAAAT VCGAMTVEAA LGSRKPFDSR
IHRVRGHRSQ MDAALGYRHL LAQNSEIGLS HQCCERVQDP YSLRCQPQVM GACLQQIRNS
ADTLEIESNS VSDNPLVFAE DGDIISGGNF HAEPIAMAAD NLALAIAEIG SLSERRMALL
IDSGLSKLPP FLVDNGGVNS GFMIAQVTAA ALASENKSLA HPASVDSLPT SANQEDHVSM
ATFAARRLGD MAENTRGILA VELLASAQGL DFRAPNKSSE KIEQAKAMLR ERVDFYDKDR
YFAPDIAKAN ALLLEATYNQ LMPESLLPSI