Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0708 |
Symbol | hutH |
ID | 6962492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 775737 |
End bp | 777269 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643381984 |
Product | histidine ammonia-lyase |
Protein accession | YP_002265022 |
Protein GI | 209809484 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.085386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAT TAGAAATTAT TCCAGGCAAG TTATCTCTAA AACAGTTACG TGAAGTTAGC CGTCACCCTA CTCAACTTTC ACTTCATCCA GACGCTTTAC CCGATATGAT CACCAGTGCC GAGGTGGTGG CTCAAGTGAT CCGAGACGGT AAAACCGTTT ATGGCATTAA TACCGGGTTT GGGTTGCTCG CCAATACCTG TATTGCAGAA GAAGATCTAG AAACACTGCA ACGCAGTATT GTTCTGTCGC ATGCTGCGGG TATTGGTCAA TTCATGGACG ACGCAACCGT TCGGTTAATG ATTGTCCTAA AAGTAAACAG CCTTTCTCGC GGATACTCAG GCATTCGTCC ACTGGTAGTA AACGCATTAA TTCAATTAGT TAACTCTGAG GTGTATCCCT GCATTCCTAA AAAGGGGTCT GTTGGTGCCT CTGGCGATCT TGCTCCTTTA GCTCACATGA GTACCGTTTT ATTGGGCGAA GGTGAAGCCC GTTATAAAGG CGAAGTGATT TCAGGTCAAA GAGCCTTAGA AATCGCAAAG TTAGATCCAA TAACACTCGC ACCAAAAGAA GGATTAGCGC TACTGAACGG AACTCAAGCC TCTACTGCAT TTGCTCTAGA AGGTTTATTC GCTGCCGAAG ATTTATATGC TGCCGCAACG GTCTGTGGTG CAATGACGGT TGAAGCCGCA TTAGGCAGCC GTAAACCGTT TGACTCAAGA ATTCATCGTG TTCGTGGGCA TCGTAGTCAA ATGGACGCCG CATTAGGCTA TCGTCATTTA TTAGCACAAA ACAGTGAAAT AGGCTTATCA CACCAATGCT GTGAACGAGT ACAAGATCCC TATTCACTGC GTTGTCAGCC TCAAGTGATG GGCGCGTGTT TACAACAGAT CAGAAACTCT GCCGATACAT TAGAGATAGA ATCAAACTCC GTATCGGACA ATCCTTTAGT ATTCGCAGAA GATGGCGATA TTATCTCTGG CGGTAACTTT CATGCAGAGC CTATCGCAAT GGCTGCGGAT AATCTAGCGT TAGCCATTGC AGAAATTGGC AGTTTGTCTG AACGTCGAAT GGCACTGCTT ATTGACAGTG GATTAAGTAA ATTACCGCCA TTTTTAGTGG ATAACGGCGG AGTAAACTCA GGTTTTATGA TCGCGCAAGT CACCGCAGCG GCATTAGCCA GTGAAAACAA AAGTCTTGCT CACCCTGCTT CTGTTGATAG TTTACCAACG TCTGCAAACC AAGAAGATCA CGTATCAATG GCAACCTTTG CAGCCCGTCG TTTAGGGGAT ATGGCCGAAA ATACACGCGG GATATTAGCC GTCGAACTGC TCGCTTCGGC TCAAGGGTTA GATTTCAGAG CTCCAAACAA AAGCTCAGAA AAAATAGAAC AAGCAAAAGC TATGCTGCGT GAACGTGTCG ATTTTTATGA CAAAGACCGT TATTTCGCAC CAGACATTGC CAAAGCAAAC GCCCTATTGC TAGAGGCGAC ATACAATCAA CTAATGCCTG AATCATTATT GCCAAGTATT TGA
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Protein sequence | MYSLEIIPGK LSLKQLREVS RHPTQLSLHP DALPDMITSA EVVAQVIRDG KTVYGINTGF GLLANTCIAE EDLETLQRSI VLSHAAGIGQ FMDDATVRLM IVLKVNSLSR GYSGIRPLVV NALIQLVNSE VYPCIPKKGS VGASGDLAPL AHMSTVLLGE GEARYKGEVI SGQRALEIAK LDPITLAPKE GLALLNGTQA STAFALEGLF AAEDLYAAAT VCGAMTVEAA LGSRKPFDSR IHRVRGHRSQ MDAALGYRHL LAQNSEIGLS HQCCERVQDP YSLRCQPQVM GACLQQIRNS ADTLEIESNS VSDNPLVFAE DGDIISGGNF HAEPIAMAAD NLALAIAEIG SLSERRMALL IDSGLSKLPP FLVDNGGVNS GFMIAQVTAA ALASENKSLA HPASVDSLPT SANQEDHVSM ATFAARRLGD MAENTRGILA VELLASAQGL DFRAPNKSSE KIEQAKAMLR ERVDFYDKDR YFAPDIAKAN ALLLEATYNQ LMPESLLPSI
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