| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0693 |
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| Symbol | lolD |
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| ID | 6962507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 759350 |
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| End bp | 760066 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381971 |
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| Product | lipoprotein-releasing system ATP-binding protein |
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| Protein accession | YP_002265009 |
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| Protein GI | 209809471 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACC CATTATTAGT TTGTCAGGGC ATTCGTAAGG TTTACCAAGA AGGCACGATG
GAAACAAAAG TGCTTAAAGG CGTTGATTTT CAAATTAATG AAAGCGAATT AGTTGCGATT
GTTGGTTCGT CAGGTTCCGG TAAAAGTACA TTACTTCACA TTCTTGGTGC GCTTGATGAT
CCTACTGCGG GTACGGTGTA TTTCCAAGGC AATGAATTAA CGAAATTGAG TGCAAATAAG
CAAGCAAAAA TCCGTAACCA ACATATTGGG TTTGTGTATC AATTTCATCA CCTTCTTTCT
GATTTCAGTG CACTAGAGAA TGTAGCGATG CCGTTATTAA TCGGTGGTAT TAATAAGAAA
GAAGCAACGA AAAGAGCGAC AAAATTGCTT GAAAAAGTGG GTCTTGCTCA TCGTATTGAG
CACCGTCCAT CTGAACTTTC TGGTGGCGAA CGCCAACGTG TTGCGATTGC ACGTGCCTTA
GTGAATAAAC CTGCTCTGGT ATTAGCTGAT GAACCTACCG GTAACTTGGA CCATCAAACG
GCATTGGATA TTTATAATCT CATGCGTGAG TTGAATCAAG AGTCAGGCAC TGCATTTTTA
GTGGTTACTC ATGATACGGC TTTGGCTGCT AAATTGGATA AGCAATTAAG TATGCAAGAT
GGCCGTTTTA TTACTGAAAC GGTTCGCTCT AATCTAGTTC AAGACCAGGA GTCGTAA
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| Protein sequence | MSNPLLVCQG IRKVYQEGTM ETKVLKGVDF QINESELVAI VGSSGSGKST LLHILGALDD
PTAGTVYFQG NELTKLSANK QAKIRNQHIG FVYQFHHLLS DFSALENVAM PLLIGGINKK
EATKRATKLL EKVGLAHRIE HRPSELSGGE RQRVAIARAL VNKPALVLAD EPTGNLDHQT
ALDIYNLMRE LNQESGTAFL VVTHDTALAA KLDKQLSMQD GRFITETVRS NLVQDQES
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