| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0674 |
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| Symbol | gltS |
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| ID | 6962478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 738870 |
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| End bp | 740093 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381953 |
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| Product | sodium/glutamate symport carrier protein (glutamate permease) |
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| Protein accession | YP_002264991 |
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| Protein GI | 209809453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00660523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAACA CTTTATCTAT TGGCGCTTTA GAATCGTTCT TGATTGCTAT CGCTGTGCTT
TTTCTTGGTC ATTTCATTAA TTCAAAAATT AACTTATTTA AGAAATACAA CATACCAGAA
CCTATCGTCG GTGGATTAAT TGTTGCTTTT GCTATTACCC TTTTGCATTT TCAAGGGATA
AGTCTTGAGT TCTCATTACC ATTGCAAAAC ATATTCATGC TTATGTTTTT TAGTACCGTA
GGATTGGCAG CCAATTACAC ACAACTGCTT AAGGGGGGAT CTAAAGTCTT CCTATTCTTA
GCCGTCGCGT CTTTCTATAT TTTAATTCAA AATGCCGTTG GTGTTAGTTT AGCAACCGCA
ATGGGATTGG ATCCTCTGAT GGGACTTATT GCAGGTTCAA TCACATTATC AGGCGGCCAT
GGAACGGGTG CAGCTTGGTC TCAGACCTTT GCTGACACGT ACAATTTAAA CACTTTAGAG
CTTGCTATGG CATCAGCGAC TTTTGGTTTG ATTATGGGGG GGTTGATCGG GAGTCCAATC
GCACAAAAAT TAATTCATAA ACACAAATTA GAGTCTGAGT ACGCCGTAGG TACAGATACT
CATGCTCGTT TTCCTGAATT AGTCACTTAT AATGAAAGAG AAGAAGATAA AGTAACCTCT
AAAAAAGTCA TCGAGACGTT ATTCATATTA CTCCTTTGTG TTGTCGGCTC TGAGCACCTC
AGTAATTTTG TGGATAGTTT TGGTATTTCT TGGCTTAAAA TTCCTGATTT TGTTTACGCT
TTATTTATTG GTGTTTTCAT CACGAACCTA ACGGAAGTGA CTAAAATCCA CAAAATTGAT
ACGATAACCG TAGATATTTT GGGTACGGTT TGTTTATCAC TTTTCTTAGC AATGGCATTA
ATGAGCTTAA AATTGTGGAA TATTTTTGAC CTTGCCATTC CTTTCTTGAT TATCTTATCC
GTTCAAACGG TAGTCTTAGC GCTTTTCTCT TACTTTGTAA CCTTCAGGGT GATGGGATCA
AACTATGATG CAGCGGTAAT GGTAGGTGGT CATTGTGGAT TTGGATTAGG AGCAACACCA
ACAGCGGTTA TGAATATGGG GTCATTAGTG TCTCGATTTG GCCCTTCCCC TCAAGCCTTT
ATGGTGGTTC CAATTGTCGG AGCCTTCTTC ATTGATATAA CTAACTTAAT CATTCTACAA
GCGTACATTA GCTTTATTGG ATAA
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| Protein sequence | MTNTLSIGAL ESFLIAIAVL FLGHFINSKI NLFKKYNIPE PIVGGLIVAF AITLLHFQGI
SLEFSLPLQN IFMLMFFSTV GLAANYTQLL KGGSKVFLFL AVASFYILIQ NAVGVSLATA
MGLDPLMGLI AGSITLSGGH GTGAAWSQTF ADTYNLNTLE LAMASATFGL IMGGLIGSPI
AQKLIHKHKL ESEYAVGTDT HARFPELVTY NEREEDKVTS KKVIETLFIL LLCVVGSEHL
SNFVDSFGIS WLKIPDFVYA LFIGVFITNL TEVTKIHKID TITVDILGTV CLSLFLAMAL
MSLKLWNIFD LAIPFLIILS VQTVVLALFS YFVTFRVMGS NYDAAVMVGG HCGFGLGATP
TAVMNMGSLV SRFGPSPQAF MVVPIVGAFF IDITNLIILQ AYISFIG
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