Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0669 |
Symbol | rbgA |
ID | 6962482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 731955 |
End bp | 732890 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381948 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_002264986 |
Protein GI | 209809448 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.378944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC AATGGTACCC GGGCCACATG CACAAAGCTC AAAAAGAGAT CGCAGAAGTG ATCCCTAAAA TGGATGTGAT CATTGAAGTA CTTGATGCTC GTATCCCTTT CAGTAGTGAG AATCCAATGA TCGCCTCTCT ACGTCAAGAT AAGCCTTGTA TTAAAGTATT GAACAAGCGT GATTTAGCTG ATCCAGAAGT GACTCAACTT TGGATTGAGC ATCTTGAGAA AGAGCAAGGT GTCACAGCAA TGGCAGTGAC AACTAACAAC CCAGATGAAA TCCATAAAAT TATGGAAAGA TGCCGTAAAT TAGTTCCACA CCGTGAAGCG ATGGGTAAAA ATGTACGTAC TATGATCATG GGTATCCCAA ACGTAGGGAA ATCAACCATC ATTAATACAC TTGCTGGCCG AATGATTGCA ATCACGGGTA ACCAACCAGC AGTAACACGT CGCCAACAAC GAATTAATCT TCAAAATGGT GTGGTTCTTT CTGATACCCC AGGGATTTTG TGGCCAAAAG TAGAGAACCC ACACAGTGGT TTCCGTCTTG CTGCAACTGG TGCGGTAAAA GATACGGCAA TGGAATACGA TGAAGTTGCT TTCTATACCG TTGAGTATCT AGCACAGCAA TATCCAGAAC GTTTAAAAGA GCGTTACAAT TTAGAAGATT TGCCAGATAA CGATTTAGAA TTAATGGAAG CCATTGGTCG CAGTCGTGGT TGTTTACAAT CTGGTGGACG AATCAATATC TACAAAGCGT CTGAAATTCT ACTTCATGAA CTTCGCTCTG GTACATTAGG TCAATTGACT CTAGAACGAC CTGAAATGAT TTCAGCTGAA TTAGAACAAG TTGAGCGTGA TGCTGCGTTA AAAATTGAAT TACAGATTAA GAAAAAAGAA GAACGTCGTA AGCGTTACTT AAAAAATAAA CGTTAA
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Protein sequence | MSIQWYPGHM HKAQKEIAEV IPKMDVIIEV LDARIPFSSE NPMIASLRQD KPCIKVLNKR DLADPEVTQL WIEHLEKEQG VTAMAVTTNN PDEIHKIMER CRKLVPHREA MGKNVRTMIM GIPNVGKSTI INTLAGRMIA ITGNQPAVTR RQQRINLQNG VVLSDTPGIL WPKVENPHSG FRLAATGAVK DTAMEYDEVA FYTVEYLAQQ YPERLKERYN LEDLPDNDLE LMEAIGRSRG CLQSGGRINI YKASEILLHE LRSGTLGQLT LERPEMISAE LEQVERDAAL KIELQIKKKE ERRKRYLKNK R
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