Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0668 |
Symbol | gntR |
ID | 6962456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 730665 |
End bp | 731678 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381947 |
Product | HTH-type transcriptional regulator GntR (gluconate utilization system Gnt-I transcriptional repressor) |
Protein accession | YP_002264985 |
Protein GI | 209809447 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.275701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATT TACATACACA GCGTAAAACG CGACCGACAT TACAAGACAT CGCTGACCGG GTTGGCGTGA CAAAAATGAC GGTTTCTAGG TTTATTCGTG ATCCGAATTC GGTCGCAGAA AAAACGCGCG AAAAAATATC CGCGATGATT AATGAGCTTG GCTATATTCA AAACCGCGCT CCAGCAATGT TATCTAAATC TTCCAGTAAA GCGATTGGCA TTCTTCTCCC ATCTTTATCT AATCAAGTTT TTGCCAATTT AGTTCAAGGT ATTGAGCAAG TCACGAAAGA ACGTGGTTAT CAAACACTGA TTGCGCATTG TAATTATGAT GAATTAGAAG AAGAGGAACA AATTTCATTT CTACTTTCAT ATCAAGTGGA TGGTTTGATC TTAACAGAAA CGAAACATAC TGATAGAACT CGTCAAATGC TTAAGTCCGC GGGCGTTCCT GTTGTTGAAA CGATGGAATT ACCAGAAAAC CCAATAGACA TGGCGGTAGG GCTGGATCAT ATGGAGGCTG CATACCATGT AGTGACCCAA ATGATAGCCA GTGGCAAACG TCATATTATG TATTTTGGGG CTCGTTTAGA TACTCGAACG AAGCTGCGCC GACAAGGGTA TGATAAAGCA ATGATCGAAG CTGGTTTGCT TGCTCGTCAT ATTTTGACTG ATGAACATTC AAGTTTTACG TTAGGTGGAG CCTTGTTAAT TGAAGGGCTT GAGCTTATGC CTGAGCTTGA TGGTATCTTT TGTACTAATG ATGATATCGC TATTGGTGCA ATGATGGAAT GTGCGCATAG AGGTATTTCG GTTCCTAATG ACATCAGTAT TGTAGGTTAT AATGCGTTAG ATATTGGTCA AGCTATCTCG CCAAGACTGG TTAGTGTTGA TACGCCTCGC TTTGACATTG GTAAAAAAAG TGCAGAATTA TTATTAGATG CTTTAGCGAA TAAAAGACAA GATCAGAAAG TGGTCGATAT GGGCTTTTCA TTGACTGAAG GCGATAGTCT GTAA
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Protein sequence | MSNLHTQRKT RPTLQDIADR VGVTKMTVSR FIRDPNSVAE KTREKISAMI NELGYIQNRA PAMLSKSSSK AIGILLPSLS NQVFANLVQG IEQVTKERGY QTLIAHCNYD ELEEEEQISF LLSYQVDGLI LTETKHTDRT RQMLKSAGVP VVETMELPEN PIDMAVGLDH MEAAYHVVTQ MIASGKRHIM YFGARLDTRT KLRRQGYDKA MIEAGLLARH ILTDEHSSFT LGGALLIEGL ELMPELDGIF CTNDDIAIGA MMECAHRGIS VPNDISIVGY NALDIGQAIS PRLVSVDTPR FDIGKKSAEL LLDALANKRQ DQKVVDMGFS LTEGDSL
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