Gene VSAL_II0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0668 
SymbolgntR 
ID6962456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp730665 
End bp731678 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content40% 
IMG OID643381947 
ProductHTH-type transcriptional regulator GntR (gluconate utilization system Gnt-I transcriptional repressor) 
Protein accessionYP_002264985 
Protein GI209809447 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.275701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT TACATACACA GCGTAAAACG CGACCGACAT TACAAGACAT CGCTGACCGG 
GTTGGCGTGA CAAAAATGAC GGTTTCTAGG TTTATTCGTG ATCCGAATTC GGTCGCAGAA
AAAACGCGCG AAAAAATATC CGCGATGATT AATGAGCTTG GCTATATTCA AAACCGCGCT
CCAGCAATGT TATCTAAATC TTCCAGTAAA GCGATTGGCA TTCTTCTCCC ATCTTTATCT
AATCAAGTTT TTGCCAATTT AGTTCAAGGT ATTGAGCAAG TCACGAAAGA ACGTGGTTAT
CAAACACTGA TTGCGCATTG TAATTATGAT GAATTAGAAG AAGAGGAACA AATTTCATTT
CTACTTTCAT ATCAAGTGGA TGGTTTGATC TTAACAGAAA CGAAACATAC TGATAGAACT
CGTCAAATGC TTAAGTCCGC GGGCGTTCCT GTTGTTGAAA CGATGGAATT ACCAGAAAAC
CCAATAGACA TGGCGGTAGG GCTGGATCAT ATGGAGGCTG CATACCATGT AGTGACCCAA
ATGATAGCCA GTGGCAAACG TCATATTATG TATTTTGGGG CTCGTTTAGA TACTCGAACG
AAGCTGCGCC GACAAGGGTA TGATAAAGCA ATGATCGAAG CTGGTTTGCT TGCTCGTCAT
ATTTTGACTG ATGAACATTC AAGTTTTACG TTAGGTGGAG CCTTGTTAAT TGAAGGGCTT
GAGCTTATGC CTGAGCTTGA TGGTATCTTT TGTACTAATG ATGATATCGC TATTGGTGCA
ATGATGGAAT GTGCGCATAG AGGTATTTCG GTTCCTAATG ACATCAGTAT TGTAGGTTAT
AATGCGTTAG ATATTGGTCA AGCTATCTCG CCAAGACTGG TTAGTGTTGA TACGCCTCGC
TTTGACATTG GTAAAAAAAG TGCAGAATTA TTATTAGATG CTTTAGCGAA TAAAAGACAA
GATCAGAAAG TGGTCGATAT GGGCTTTTCA TTGACTGAAG GCGATAGTCT GTAA
 
Protein sequence
MSNLHTQRKT RPTLQDIADR VGVTKMTVSR FIRDPNSVAE KTREKISAMI NELGYIQNRA 
PAMLSKSSSK AIGILLPSLS NQVFANLVQG IEQVTKERGY QTLIAHCNYD ELEEEEQISF
LLSYQVDGLI LTETKHTDRT RQMLKSAGVP VVETMELPEN PIDMAVGLDH MEAAYHVVTQ
MIASGKRHIM YFGARLDTRT KLRRQGYDKA MIEAGLLARH ILTDEHSSFT LGGALLIEGL
ELMPELDGIF CTNDDIAIGA MMECAHRGIS VPNDISIVGY NALDIGQAIS PRLVSVDTPR
FDIGKKSAEL LLDALANKRQ DQKVVDMGFS LTEGDSL