Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0657 |
Symbol | |
ID | 6962044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 706964 |
End bp | 708316 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381936 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_002264974 |
Protein GI | 209809436 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAGTGGC AGCTTTTGCA ATTTAAAGAT TTAGGTTTAG ATAATCGCCT ATTAAAAAAT CTCGCTCATC AAAACATTAA AAAACCAACT GAAATTCAAC GTAAAGCCGT ACCTGTTGCC ATGGCAGGGA AGGATGTTCT TGCGTCGTCT AAAACGGGTT CTGGTAAAAC ATTAGCATTC GTATTACCGA TGCTTCATAA ATCACTTAAA TCGAAATCAT TCTCTAAGAA TGACCCTCGT GCTGTGATTT TAGCACCAAC ACGTGAACTA GCAAAACAAG TGTATATGCA CCTGCGTGCA ATGTTAGGTG GTTTAACGTA CGATGCTGCA TTGATCACTG GTGGTGAAAA CTTTAACGAC CAAGTGAACG CATTACGTAA ATTCCCTAAA TTTATTGTCG CGACACCAGG ACGCTTAGCG GATCATCTTG AGCATCAATC TCTGTTCTTG AATGGTTTAG AAATGCTTAT TCTTGACGAA GCTGACCGTA TGCTTGATTT AGGTTTTGCT GAGCATTTAC AAAAAATTCA TGCGGCAGCA AATCACCGTC GACGTCAAAC GCTTATGTTC TCTGCAACAT TAGACCATGA AGCAGTGACT AAATTTGCAG GCAACATGCT AGATAATCCT AAAGTTGTTT CTGTTGGTTT ATCAACGGAT CAGCATGCAG ATATCACGCA AAGTTTCTAC TTGTGTGATC ATTTAGATCA TAAACAAGCG TTGTTAGATA AAATCATTGA AACGGAAAAA TACTTCCAAA TCATGATATT CACAGCAACA CGTGCAGATA CCGATCGCTT AACTGATTTA CTTAACGAAC GTAAATTAAA AGCGGTAGCA TTAAGTGGTG ATATGAACCA AACCGCTCGT AATAATATTA TGAGTCAGTT TGAACGTCGT GCACATAAAA TCCTAGTAAC GACTGATGTT GCTTCTCGTG GTTTAGATTT AACCAGTGTA ACTCACGTTA TCAACTTTGA TATGCCAAAG CATATGGAAG AGTATGTTCA CCGCGTTGGT CGTACTGGTC GTGCTGGTAA GAAAGGGACA GCAATTTCTC TTGTCGGACC AAAAGATTGG GAAAGCTTTA AGCGTATAGA GACATTTTTA CAACAAGACT TGGCGTTCTC TGAATTCGAA GACTTGAAAG GTAAATTCAA AGGTCTTAAG CCAAAACATA AACGTGAATT TGTGAAAAAA GGCGATGATA AGAAAACGAC TGCAAAACGT GGTTCTTATA CTCCTAAAAA ATCGAAAAAA CGCGATAACA CATTCCACAC TAATGTGGCT GTAGGCGAGC AAGTATTTAT GCCAAAGAAA AAACCAAAGC AAATTGTTGT TGATGATGAA TAA
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Protein sequence | MEWQLLQFKD LGLDNRLLKN LAHQNIKKPT EIQRKAVPVA MAGKDVLASS KTGSGKTLAF VLPMLHKSLK SKSFSKNDPR AVILAPTREL AKQVYMHLRA MLGGLTYDAA LITGGENFND QVNALRKFPK FIVATPGRLA DHLEHQSLFL NGLEMLILDE ADRMLDLGFA EHLQKIHAAA NHRRRQTLMF SATLDHEAVT KFAGNMLDNP KVVSVGLSTD QHADITQSFY LCDHLDHKQA LLDKIIETEK YFQIMIFTAT RADTDRLTDL LNERKLKAVA LSGDMNQTAR NNIMSQFERR AHKILVTTDV ASRGLDLTSV THVINFDMPK HMEEYVHRVG RTGRAGKKGT AISLVGPKDW ESFKRIETFL QQDLAFSEFE DLKGKFKGLK PKHKREFVKK GDDKKTTAKR GSYTPKKSKK RDNTFHTNVA VGEQVFMPKK KPKQIVVDDE
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