Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0582 |
Symbol | gly |
ID | 6962530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 638108 |
End bp | 639208 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381869 |
Product | L-allo-threonine aldolase |
Protein accession | YP_002264907 |
Protein GI | 209809369 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.519824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTGTT ACATTTATAA ACACTATTAT AGCGTTGTTG AAATATATAA TAATGGCAAG AAACCCTCTC TAGTAATAAA TGGTAATCAA GGAAGAAGCA TGATTGATTT TCGCTCTGAC ACCGTAACCC GTCCAACTCA AGCTATGCGT GATGCAATGG CTAATGCCCT TGTCGGTGAT GACGTTTATG GTGATGACCC GACTGTAAAT GAGTTAGAAC AATGGACCGC AGAGCGTCAT GGATTTGAAG CGGCATTATT TACCTCTTCA GGTACTCAAG CTAATTTGCT CGGCTTAATG ACGCATTGTG AACGTGGTGA TGAGTATTTA TGTGGGCAAC AAGCGCATAA CTACAAATAC GAAGCTGGCG GAGCGGCGGT TTTAGGTTCA ATCCAACCTC AACCGATTGA GAATAATCCA GACGGCTCGT TGTGTTTTAC AAAACTAGCA GCTGCGATTA AAGCCGATGA TTTTCATTTT GCTCGTACAA AATTGTTAAG TCTTGAAAAT ACAATTAATG GGAAAGTGTT GCCATTATCT TATCTTGCTC AAGCTCGTGA GTTTGTTAAT AAGCATAATT TAGCGCTTCA CTTAGACGGC GCTCGTGTTT ATAACGCAGC AACAGCACTT AATGTTGATA TTAAAGAAAT CGCACAGCAT TTTGATAGCA TGACTATCTG TTTATCAAAA GGGTTATCGG CACCCATTGG TTCTTTGTTG TTAGGCCCGA AAGAGTATAT CCAGAAAGCA CGCCGCATTA GAAAAATGTT AGGTGGTGGC ATGCGTCAAG CCGGTATCCT TGCCGCCGCA GGTAAATTGG CGTTAACTGA GCAAGTTCCT CAGTTAGCTA TAGACCACAG CAACGCAAAA TACCTTGCTA AACAATTGAA TACGGTGGAT GGTTTTTCTG TCAATGTTGA ACATATTCAA ACAAATATCG TATTTGCAAA ATTAGACGCG AACGTTGATA TACACCATAT TGAACAAAAA GCTCAACAGC AAGATATCTT AATCTCTGCG GGTAACCCTA TCCGTTTTGT GACACATAAA GACATTTCAA AAGATGATAT CGATACGTTT ATTGCCTTTT TAAACGCATA A
|
Protein sequence | MDCYIYKHYY SVVEIYNNGK KPSLVINGNQ GRSMIDFRSD TVTRPTQAMR DAMANALVGD DVYGDDPTVN ELEQWTAERH GFEAALFTSS GTQANLLGLM THCERGDEYL CGQQAHNYKY EAGGAAVLGS IQPQPIENNP DGSLCFTKLA AAIKADDFHF ARTKLLSLEN TINGKVLPLS YLAQAREFVN KHNLALHLDG ARVYNAATAL NVDIKEIAQH FDSMTICLSK GLSAPIGSLL LGPKEYIQKA RRIRKMLGGG MRQAGILAAA GKLALTEQVP QLAIDHSNAK YLAKQLNTVD GFSVNVEHIQ TNIVFAKLDA NVDIHHIEQK AQQQDILISA GNPIRFVTHK DISKDDIDTF IAFLNA
|
| |