| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0579 |
|---|
| Symbol | pykA |
|---|
| ID | 6962611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 634373 |
|---|
| End bp | 635818 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643381866 |
|---|
| Product | pyruvate kinase II |
|---|
| Protein accession | YP_002264904 |
|---|
| Protein GI | 209809366 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0469] Pyruvate kinase |
|---|
| TIGRFAM ID | [TIGR01064] pyruvate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACA GACTACGTAG AACAAAAATC GTTTGTACTC TTGGCCCTGC AACTGACCGT
GATAACAATC TTGAAAAAAT CATTGTCGCT GGTGCAAACG TTGTTCGTAT GAACTTTTCA
CACGGTAGCG CAGAAGACCA CATCGAACGT GCAAAAAAAA TTCGGGAAAT CGCAGCAAGA
CTAGGCACAC ACGTAGCAAT CCTTGGTGAC CTTCAAGGTC CTAAAATTCG CGTATCAACG
TTTAAAGACG GTAAAATCCA CTTAACTATT GGTGATAAAT TCACCCTAGA CAGCGATTTA
CCAAAAGGTG AAGGCAACCA AGAAAGCGTT GGCCTTGATT ATAAAGAATT ACCACGTGAC
GTTGTAGCAG GAGACGTTCT GCTTCTTGAT GACGGTCGTG TTCAATTAAA AGTTACCGCC
GTTGAAGGCA ATAAAGTTCA CACTGAAGTA ACGGTTGCGG GTCCTTTATC AAACAATAAA
GGCATCAACA AACAAGGCGG CGGTCTTTCA GCTGAAGCAC TAACAGACAA AGACAAAGCA
GACATCATCA CAGCTGCTGC AATGAAAGTA GATTACCTAG CAGTTTCTTT CCCACGTAAT
GGCGAAGACA TGAACTACGC TCGCCGTTTA GCGCGTGACG CAGGCCTTGA AGCGAAATTA
GTCGCTAAAG TAGAACGTGC AGAAACAGTA GCAACAGAAG AAGCAATGGA TGACATCATC
ATGGCTTCTG ACGTTGTTAT GGTTGCTCGT GGTGACCTAG GTGTTGAGAT TGGCGATCCT
GAATTAGTCG GCGTTCAAAA ACAACTGATC CGTCGTGCTC GTAGCCTTAA CCGTACGGTT
ATCACAGCAA CACAAATGAT GGAATCAATG ATCACAAGCC CAATGCCAAC TCGTGCTGAA
GTGATGGACG TTGCTAACGC CGTACTTGAT GGCTCGGATG CGGTAATGCT TTCTGCTGAA
ACAGCGGCTG GTGATTTCCC TGTTGAAACC GTAACTTCAA TGGCAAGTGT TTGTATTGGT
GCTGAAAAAG TACCAACAGT GAACGTATCT AACCACCGTT TAGACCGTCG TTTCACTACG
CCAGAAGAAA CGATTGCAAT GTCTACTATG TATGCAGCAA ACCACATGGA AGGCATCACT
GCGATGATTA CGCTGACTGA GTCTGGTCGT ACACCATTAA TGATGTCTCG TCTAAGCTCT
GGTTTACCAA TCTTCGCTTT GTCTCGTAAC GAAAGCACAC TGAACCGTGC AACACTTTAC
CGTGGTGTTA CGCCAGTGTT CTTTGATGAA AGTGCAGATT CTGGCTTACC ATCAACACAC
GCCGCTATCA ATGCACTAAA AGACAAAGGT CTATTAGTAA AAGGCGACCA AGTTATTATC
ACTCAAGGTG ATGTAATGGA CATCGTAGGC TCAACTAACT GCATGCGAAT CATTACTGTT
GAGTAA
|
|---|
| Protein sequence | MSNRLRRTKI VCTLGPATDR DNNLEKIIVA GANVVRMNFS HGSAEDHIER AKKIREIAAR
LGTHVAILGD LQGPKIRVST FKDGKIHLTI GDKFTLDSDL PKGEGNQESV GLDYKELPRD
VVAGDVLLLD DGRVQLKVTA VEGNKVHTEV TVAGPLSNNK GINKQGGGLS AEALTDKDKA
DIITAAAMKV DYLAVSFPRN GEDMNYARRL ARDAGLEAKL VAKVERAETV ATEEAMDDII
MASDVVMVAR GDLGVEIGDP ELVGVQKQLI RRARSLNRTV ITATQMMESM ITSPMPTRAE
VMDVANAVLD GSDAVMLSAE TAAGDFPVET VTSMASVCIG AEKVPTVNVS NHRLDRRFTT
PEETIAMSTM YAANHMEGIT AMITLTESGR TPLMMSRLSS GLPIFALSRN ESTLNRATLY
RGVTPVFFDE SADSGLPSTH AAINALKDKG LLVKGDQVII TQGDVMDIVG STNCMRIITV
E
|
|---|
| |