| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0577 |
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| Symbol | treB |
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| ID | 6962613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 631097 |
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| End bp | 632521 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381864 |
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| Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
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| Protein accession | YP_002264902 |
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| Protein GI | 209809364 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA TAGAGAGAAA GGACGTACAA CGTTTGATAG AACTAGTCGG GGGATCAGAG
AACATTGCGA GTGTAAGCCA TTGTTTAACT CGCTTACGTT TTGTATTAAA TGACGTGAAG
TGTGCCGACG TAAAAAGCAT TGAAAAAATT CGAATGGTAA AAGGGTGTTT TACCAATGCA
GGACAGTTTC AAGTTGTTAT TGGTACTGAA GTTGATGACG TTTTTACGAT TTTAAATGAA
TTGACGGGTG AAAAAGGCAC CTCAAAAGAG AATGCTAAAT TAGCCGCTCG TCAAAATATG
AATATTATTG AGCGTGGAAT ATCGCACCTT GCTGAGATAT TTGTTCCTTT ACTGCCAGCG
ATTATCACAG GTGGTTTGAT TTTAGGGTTT AGAAATGTCA TTGGCGACAT CAAAATGTTT
GATGGTCAGA CATTGGTTCA AATTAGCCAG TTTTGGGCCA CTGTGCATTC TTTCTTGTGG
TTGATTGGCG AAGCCATTTT CTTCTTCTTA CCCGTTGGTG TGTGTTGGTC TACGGTGAAA
AAGTTGGGCG GTACACCAAT TCTCGGCATT ACTCTAGGCA TTACTTTAGT GTCACCACAA
TTGATGAATG CGTACCTTAT TGGTAAAGAA GTCCCTGATG TATGGGATTT TGGGCTATTT
GTGATAGAGA AAGTTGGGTA TCAAGCTCAA GTCATACCCG CGATGCTTGC TGGAGTTGCT
CTCGCCTTTA TTGAAACAAA TTTGAAGCGC ATCATTCCTT CTTATCTATA CCTTGTTGTT
GTGCCATTTG TTTCTATTTT GTTGTCTGTA ATTTTAGCTC ACGCTTTCAT CGGCCCGTTT
GGGCGTATTG TTGGTGACGG AGTTGCAATG GCAGCAAAAG CAGCAATGAC AGGAGACTTT
GCAATTGTTG GTTCTGTGAT TTTTGGTTTC TTTTATGCAC CATTAGTGAT CACGGGGATC
CACCATACGA CGAATGCGGT TGATCTGCAA TTGATGCAAG AACTCGGTGG AACCCCAATT
TGGCCACTCA TTGCGTTATC AAATATTGCT CAAGCATCGG CCGTTGTCGG CATCATTATT
ATCAGTAAAA AAAGCGGTGA GCGTGATATT TCAGTACCTG CGGCTATTTC TGCGTATTTA
GGCGTTACTG AGCCCGCAAT GTACGGTATT AACTTGAAAT ACAAATTTCC GATGTTGAGT
GCGATGATTG GCTCTGCGAT GGCGGCGGCT ATTTGTGGGA GTGCAGGCGT CATGGCGAAT
GGTATTGGTG TTGGTGGTTT GCCGGGTATT CTTTCTATTC AGCCGCAATA CTGGGGTATT
TATGGCGTAG CTATGCTTGT CGCGATCGTC GTTCCTGCGA TGTTAACGCT TGCCTTGTAT
AAACGAGCGC AAGTAAAAGA ACAGCTGTAC GTTTCCGTAG CGTAA
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| Protein sequence | MSKIERKDVQ RLIELVGGSE NIASVSHCLT RLRFVLNDVK CADVKSIEKI RMVKGCFTNA
GQFQVVIGTE VDDVFTILNE LTGEKGTSKE NAKLAARQNM NIIERGISHL AEIFVPLLPA
IITGGLILGF RNVIGDIKMF DGQTLVQISQ FWATVHSFLW LIGEAIFFFL PVGVCWSTVK
KLGGTPILGI TLGITLVSPQ LMNAYLIGKE VPDVWDFGLF VIEKVGYQAQ VIPAMLAGVA
LAFIETNLKR IIPSYLYLVV VPFVSILLSV ILAHAFIGPF GRIVGDGVAM AAKAAMTGDF
AIVGSVIFGF FYAPLVITGI HHTTNAVDLQ LMQELGGTPI WPLIALSNIA QASAVVGIII
ISKKSGERDI SVPAAISAYL GVTEPAMYGI NLKYKFPMLS AMIGSAMAAA ICGSAGVMAN
GIGVGGLPGI LSIQPQYWGI YGVAMLVAIV VPAMLTLALY KRAQVKEQLY VSVA
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