Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0566 |
Symbol | |
ID | 6962572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 619300 |
End bp | 619827 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643381853 |
Product | hypothetical protein |
Protein accession | YP_002264891 |
Protein GI | 209809353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.940702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAT TTAAATGTAC CAAAAAAGTT CAAGATTTTA TTGGTATTAC ACCTAGTGAA CTTAAGGTTA TAGTGCCTGA GAAATTTGCA TTAGGTAATT GGTTTGTGCA TTCTTTTGAG GAAGATAATC ATAATGTGTT GGTGTTTATG GAAGAGAGAA CATTGTTCTC ATTCATTATT GTCGGTATTC AAAAAGAACA CATTAAAACG TTAAGAAAAC ACTTTCTGGA AGGGCTGTGT TTACAAATGA AAGCGGAAGG CGTTAGTATT CAAACCATTT CGGCATATGC GATTAATGAC ACGGTGATTC AATATACGAA AACAGACAGT ACAAATAAGG TTGGTATAAT GAATGATCTT ATTTCTCTTT ATCAATCGCG AATTGAAATT GAAGGGGGGT TATCTGAAAT TGACGTTGTT GATGTTGCCA TGAAAATAAA TCGAATACCT CAAAGCCACT TAGCTTTAAC TTATGTGGTT AAGGAGTTTA AACTGGTGCT TGGAGAGGTA ACGTCACAAT TTCATTAA
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Protein sequence | MFQFKCTKKV QDFIGITPSE LKVIVPEKFA LGNWFVHSFE EDNHNVLVFM EERTLFSFII VGIQKEHIKT LRKHFLEGLC LQMKAEGVSI QTISAYAIND TVIQYTKTDS TNKVGIMNDL ISLYQSRIEI EGGLSEIDVV DVAMKINRIP QSHLALTYVV KEFKLVLGEV TSQFH
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