Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0549 |
Symbol | |
ID | 6961954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 606153 |
End bp | 607745 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643381837 |
Product | hypothetical protein, putative phage gene |
Protein accession | YP_002264875 |
Protein GI | 209809337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.444707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTACA ATCAGAAAAG ATCTTTTTAT GAAGCTTTAA CTCGATATAA TTACTTTCCA AACCAAAAAA GTACAATTGG TGAGTTACCA CCCTGTTTAA GTACTCGTAG ATTTACCCCC GAAATAGTCG AAGAAATAGC AGCAATTCCT AAAGGTGATA ATCCCGAACC CCGTGGAAAG GGTTATGACT TAGTTGAATA TAAGGCTACT AGATATAATA ATGTTCCAAG AGTACTTTCT TTAGTTCACC CTAAAGCTCA TTCGTTACTA TGTAAGCATA TCTATGACAA TTGGGATAAA CTTAACCATA TAGAAACTAA CGAAAATAGC AAAATTAAAC CTGAATACCA TGAGGATGGT CGATATGTAA TCATGGGATA TGGGTGTGCT ATAGATAAAA TAGACGCTAT ACACTCTAAG AGTTTTGGAA AAAAATTTAG AGTTCATACC GATATATCAA ATTGTTTCAA TAGTATTTAT AGCCATTCTT TGTCTTGGGC ATTGGTCGGA ATTGATGAAG CTAAAAAGAA ATCAGGCAAC AAATTTAACT CGGAATGGTT TAATCAATAT GATTTTCATT TACGCAATAC AAAAAGGGGA GAAACTCAAG GTATACCAAT AGGACCAACA ACATCAAATG TTGCTGTAGA AGTAATATTA GGTAAAGTTG ATGGTGTATT AATCGAAAAT AAATTCGATT TCCAGCGCCA CATAGATGAC TATGAATGCT TTTGTCTTAC TAGAGAAGAC GCTGATAAGT TCATTCTAAT TCTTGGTAAA GAATTAGCAA AATACAAACT CACGTTACAT TTAAATAAAA CCAAAATTAT TGAACTCCCT CATCCCCATG AGGATGAATG GACAATTGAA CTCAAATCTG CCCTTCCAAG CAGACTTCAA AATGACAATG ATGCTCCTAA ATTAAGCCCA TCAGAAGCCT TGTCTTTTTT AAATAAGGCC GTTTTACTAA ATAAAGCTAC ACCTGATGGT AGTGTCTTAA AATATGCTAT ACATATTATA TTAAATTATT TACAAGATAA TACAGCCCCA TCGGTTTATT CATGTGTATT AAATTTAGCA TGGCACTACC CAATATTAAT TCCTTTTTTA GATACCTTAA TTGAAAAATC TGATTTAAGA CCTGATTCTT ACACCGAAAA TTTAAACCAA ATAATTATTG AAAATGCTAA GCATAGTCGC TCCGATGGCA TGTGCTGGCC ATTGCATATT TTCCGTAAAT ACGAAGTTGT CCCTTCGGAT GAAATTATAG ATATAATCCT CGAAAGTAAA GACTGCGTTG CAATTACAAT ATTAAATTCC TTTATTAAAG ATAACAATAA AATTAAAGAG TTTGCAAAAT CAATAATAGA AACTGATGAC TTATATGAAA AAGACCGATA TTGGTTACTT TTATATCAAT TATTTTTTAA TGGCGATATT AAAAATGCAT ATAAAGATAA AAAAGTGTTT GAAATAATGA AAAAAAACCA AGTTGACTTT ATTCCTACGG ATGAAATTTC AGAAGCAGAA AAGGAATGTG AACGATTAAA ATTGGTTGGT ATATTTGGCC CTATTGAAAA GCTGATTTTT TAA
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Protein sequence | MRYNQKRSFY EALTRYNYFP NQKSTIGELP PCLSTRRFTP EIVEEIAAIP KGDNPEPRGK GYDLVEYKAT RYNNVPRVLS LVHPKAHSLL CKHIYDNWDK LNHIETNENS KIKPEYHEDG RYVIMGYGCA IDKIDAIHSK SFGKKFRVHT DISNCFNSIY SHSLSWALVG IDEAKKKSGN KFNSEWFNQY DFHLRNTKRG ETQGIPIGPT TSNVAVEVIL GKVDGVLIEN KFDFQRHIDD YECFCLTRED ADKFILILGK ELAKYKLTLH LNKTKIIELP HPHEDEWTIE LKSALPSRLQ NDNDAPKLSP SEALSFLNKA VLLNKATPDG SVLKYAIHII LNYLQDNTAP SVYSCVLNLA WHYPILIPFL DTLIEKSDLR PDSYTENLNQ IIIENAKHSR SDGMCWPLHI FRKYEVVPSD EIIDIILESK DCVAITILNS FIKDNNKIKE FAKSIIETDD LYEKDRYWLL LYQLFFNGDI KNAYKDKKVF EIMKKNQVDF IPTDEISEAE KECERLKLVG IFGPIEKLIF
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