Gene VSAL_II0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0540 
Symbol 
ID6961945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp600814 
End bp601344 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content37% 
IMG OID643381828 
Producthypothetical protein, putative phage gene 
Protein accessionYP_002264866 
Protein GI209809328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTATT CCAAGACTTT TAAAGAATTG GATAAATCAC AACACGATAG AGCATCATTT 
GACTGCGGTG AAAAAGAGTT AAATGATTTT ATCCAAACTC AAGCCGCTAA ACATATGCAA 
GCAGGTATCA GCCGCACTAT GGTTTTGCCT GCTTCTGTGC CTCTACCAAA TCAAAAATAT 
CCAATTTGTT CATTTTATAG TATTGCGCCA AGTTCAATTA GCCGTGATAC GTTGCCACAA 
GCCATGGCTA AAAAATTACC ACGCTATCCA ATTCCTGTTT TTCTTTTAGC TCAATTGGCA 
GTTCATAAAG AATTTCATGG AAGTGGGTTA GGTAAAGTTA GCTTAATCAA AGCTCTAGAA 
TATCTTTGGG AAATTAACTC TCACATGAGA GCATATGCCA TTGTTGTTGA TTGTTTAACT 
GAACAAGCTG AGTCATTCTA CGCAAAATAT GGTTTCGAGG TTCTTTGTGA AATCAATGGT 
CGTGTAAGAA TGTTCATTCC GATGAAAACA GTCGGTCAGT TATTCACTTA G
 
Protein sequence
MSYSKTFKEL DKSQHDRASF DCGEKELNDF IQTQAAKHMQ AGISRTMVLP ASVPLPNQKY 
PICSFYSIAP SSISRDTLPQ AMAKKLPRYP IPVFLLAQLA VHKEFHGSGL GKVSLIKALE 
YLWEINSHMR AYAIVVDCLT EQAESFYAKY GFEVLCEING RVRMFIPMKT VGQLFT