Gene VSAL_II0523 details

Gene Information

• Locus tag: VSAL_II0523
• ID: 6961930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 583942
• End bp: 585801
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643381813
• Product: hypothetical protein
• Protein accession: YP_002264851
• Protein GI: 209809313
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGATT TTACTTTCCT TTATCCGATG TGGTTTTTAG CGCTTATCCC TTTGGGATTG 
TTGGTTATTG TTCAGCGTAA AAACCGCCAT CATGTGGGCT TAATTGCGCC GCACATTGCT 
AAACAACTTG GAATGGTTCA GAAAAAGCAA TCCAATACGT TTTTATCTGG CTTAATATTG 
ACGTGGGTAT GTATTACGAC GGCATTAGCA GGCCCAAGTT TTGGCTATAA AGACACGCCG 
AGCTTTCAGC TTTCTGGTGC TCGTATTTTA GTGATGGACA TGTCTCGCTC GCTTTATGCG 
ACAGACGTAA AGCCCAATCG CTTAACGCAG GCAAAATACA AAGCGAATGA TCTTCTGCCT 
TATTGGAAAG AAGGCATGAC AGGGTTAGTT GCCTACGCCA ATAACAGCTA TTTGATTAGT 
CCATTAACCG AAGACAGTAA AACGTTAGAG AACTTGATTC AAAATTTATC GCCAGAAATC 
ATGCCCTACA AAGGCAAAGG CAGTAATTTA TCTAGCGCGA TTTCTCAAAG TATTGAGATG 
ATGAAAAAAT CAGGCCATCA GCAAGGGGAC ATTATCGTTA TCACCGATGG CATTTCAAAC 
GCACAGCTAG ATAAAGTCAC CGAACGGGTA AAAGGCACAA AATGGCGCAT TAGCTTGTTA 
GGTATTGGGA CTAAAAATGG CGCGCCCATT GAATTGCCTT CAGGTCAATT ATTGACAGAC 
CGTTCAGGAA AAACCGTTGT TGCAACCTTG GATCCTCAAC CGCTCATTAC CTTAGCGAAT 
GAAACCAAAG GCATTGCTGA GTTAATTCAA TCAGACAACA GTGACATTGA AGCCATTGCT 
CGATTAACCA AAACTCCCGT AGAGCAAATC ACTCAAAACA GTGATACACA AGTAAATAGC 
CGAGCGAATC ATGGGTATTG GTTACTCTTC CCTATTGTCT TATTAACTCT GCTTTCTTTT 
AGAAAAGGGC TGATCTTAGC CTTATTGTTG GTATTGCTTC CGGTAGATAA ATCGATGGCA 
AATACTCTGT TGTCTGATGA CTACAATGCG CATCAACAAT TTGAACAAAA GAATTACCAA 
GAAGCCAGTG GGCAATTTAA CTCGAAAGAG TGGAAAGGCG CAGCACAATA CAAAGCCGGT 
GATTATAAAG GAGCCATTGA AAGTCTGTCT GGATTAAAAG ACCCTCAATC TCAATATAAT 
CTGGCAAATG CATTGGCACA AAGTGGTCAG CTTGAAGAAG CAAAAGAAAA ATACGAGTCG 
TTGTTAAATA ACAATCCTGA CATGGAAGAT GCGAAAAAGA ATCTTGAGGT TGTGAAAAAA 
GCGCTAGAGC AAAAACAGCA ACAGCAACAG CAACAGCAAG ATGACAAAAA CAAAAAATCA 
GATAACAAAC AAGACCAAAA GAAAGATCAG AAAAAGGATC AAAAAAAGGA TCAAAAACAG 
AATTCAGATA AGCCATCCGA CTCTAAAGAT TCTAAGTCTC AAGATTCACA GCAGAATCAG 
CAGAATCAGC AGAATAAAGA ATCAAAGTCT GAAAAGTCTG AAAAGTCTGA AAAGTCTGAA 
AAGTCTGAAA AAGATGCCGC GTCAAAAGAA AAAGAACAAC AGCAAAAACA AGAAGAAGAG 
AAATCAGCCG CAGCTAAAGC TGAAGAAGAC AAAAAAAGCG AGCAAGATAA AGCAGACGAG 
AAACAACAAG CTCAGATGCA ATCACAACAA GTGCCACCAA ACAGTGATGT GATAAAAACC 
GATCCTCGTT TACAGAAACT AGAGCAATCT GGCGCAAAAG AAGATCAATT ACTTCGTGCC 
CAACTCTATT TACAAGCTCA ACAACAAGAA GCGCCACAAG CTTCTGAAAA TGAATGGTAA 

 

Protein sequence

MADFTFLYPM WFLALIPLGL LVIVQRKNRH HVGLIAPHIA KQLGMVQKKQ SNTFLSGLIL 
TWVCITTALA GPSFGYKDTP SFQLSGARIL VMDMSRSLYA TDVKPNRLTQ AKYKANDLLP 
YWKEGMTGLV AYANNSYLIS PLTEDSKTLE NLIQNLSPEI MPYKGKGSNL SSAISQSIEM 
MKKSGHQQGD IIVITDGISN AQLDKVTERV KGTKWRISLL GIGTKNGAPI ELPSGQLLTD 
RSGKTVVATL DPQPLITLAN ETKGIAELIQ SDNSDIEAIA RLTKTPVEQI TQNSDTQVNS 
RANHGYWLLF PIVLLTLLSF RKGLILALLL VLLPVDKSMA NTLLSDDYNA HQQFEQKNYQ 
EASGQFNSKE WKGAAQYKAG DYKGAIESLS GLKDPQSQYN LANALAQSGQ LEEAKEKYES 
LLNNNPDMED AKKNLEVVKK ALEQKQQQQQ QQQDDKNKKS DNKQDQKKDQ KKDQKKDQKQ 
NSDKPSDSKD SKSQDSQQNQ QNQQNKESKS EKSEKSEKSE KSEKDAASKE KEQQQKQEEE 
KSAAAKAEED KKSEQDKADE KQQAQMQSQQ VPPNSDVIKT DPRLQKLEQS GAKEDQLLRA 
QLYLQAQQQE APQASENEW