| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0518 |
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| Symbol | htrB |
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| ID | 6961928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 576580 |
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| End bp | 577536 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381808 |
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| Product | lipid A biosynthesis lauroyl acyltransferase |
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| Protein accession | YP_002264846 |
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| Protein GI | 209809308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.874009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAA CCGTTCCAAG CCCTAAATTT ACATGGAATC TATTGTCTCC GAAATATTGG
TTTTTATGGG GCTTTTTTGC TGTTCTTGCT CTTTTAGTTA ATGTCCTTCC TTTTTTTATC
CTTAAATTAT TGGGGAGTGG AATAGGAAAA GTCTTTCAGC TATTTTTAAA GAAGCGGGGA
GATATTGCTC GAAAAAACTT AACGCTCAGT TTTCCTCATT ATTCGCGATT AGAAATAGAA
AAGATCGTTC AAGAGAATTT TAAAAACACA GGCTTAGCCA TTATTGAAAT GGGAATGGCG
TGGTTTTGGC CTGATTGGCG AGTTAGACGT CACGTATCGA TCATTGGTAA AGAAAAAATA
TTAGAGCAAG AAAAAGAAGG GCGAGGCGTA CTAGTTATAT GTTGTCACTT TTTAAACTTG
GAAATGACGG CTCGAATATT CAGTCTATTT GCTCCTGGCT ATGGCGTTTA TCGTGCTAAC
AGTAACCCTG TATTTGAGTT TATTCAACAC CGAGGTCGTA CCCGTAAAGG CCACCAGATG
ATCGATCGTC ATGATGTAAA AAGTATGGTT AAAGTACTTA AATCTGGCAA TCGTCTTTGG
TATTTGCCTG ATCATGATTA TGGCAAGAAA AACGCCGTAT TTGTTCCATT TTTTGCTGTA
GAAGAAGCGG CAACAACGAC GGGATCTAGT TTCTTAATTG ATATGTCTAA ATGTGCGGTG
ATGTCAGGAT CGAGTATTCG AAAAGGCAGT CACTATACGT TAGAAGTGGG TAATGATTTA
AGCGATGAAA TCCCTCGCAG AGACGCGATA ACCGCCGCTA AAGTATTGAA CCATGAGATT
GAGCGTTTAA TTAATAAAGG GCTCTCTCAA TGGATGTGGT TGCATAAGCG TTTTAAAACT
CAACCTGAGA GTGCACAAGA TCAAGACAGA TATAAGAATG TGATCCTGCA CGATTAA
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| Protein sequence | MMKTVPSPKF TWNLLSPKYW FLWGFFAVLA LLVNVLPFFI LKLLGSGIGK VFQLFLKKRG
DIARKNLTLS FPHYSRLEIE KIVQENFKNT GLAIIEMGMA WFWPDWRVRR HVSIIGKEKI
LEQEKEGRGV LVICCHFLNL EMTARIFSLF APGYGVYRAN SNPVFEFIQH RGRTRKGHQM
IDRHDVKSMV KVLKSGNRLW YLPDHDYGKK NAVFVPFFAV EEAATTTGSS FLIDMSKCAV
MSGSSIRKGS HYTLEVGNDL SDEIPRRDAI TAAKVLNHEI ERLINKGLSQ WMWLHKRFKT
QPESAQDQDR YKNVILHD
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