| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0511 |
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| Symbol | sodC |
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| ID | 6961922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 570635 |
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| End bp | 571147 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381802 |
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| Product | superoxide dismutase [Cu-Zn] precursor |
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| Protein accession | YP_002264840 |
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| Protein GI | 209809302 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2032] Cu/Zn superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.59112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAA AACTTTTACT TACTACCTTG TTCGTCGCGT CAGCTGGAGC GAGTGCCTCA
GACATTTCAA TTGAGATGAA AGATTTAGAC TCAGGTAAAA TCGTGGGTTA TGTATCAGCA
GAGCAAAATG AGTATGGCGT GGTATTTACA CCTAATTTGT CAGGATTACC ACAAGGTTTA
CATGGTTTTC ATGTCCACGA AAATCCTTCT TGTGATACCT CTGAAAAGAA TGGTCAAACT
ATTTTAGGCG GTGCAGCAGG AGGCCATTAT GACCCAATGA AAACAGGGCA ACATGGTTTT
CCATGGTCTA ATGATAGCCA TTTAGGGGAT CTGCCTCCGC TTTACGTCGA TATGGACGGC
AATGCAGTGC AACCCGTCTT ATCACCTAAA ATCACGCTTG CTAACTTATC TGGTCGTGCA
TTAATGATAC ATGCTGGCAG TGATAATCAT TCTGACCATC CTAAAGCTCT GGGTGGCGGT
GGCGCTCGTT TAGTGTGTGG TGTTATCAAG TAA
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| Protein sequence | MFKKLLLTTL FVASAGASAS DISIEMKDLD SGKIVGYVSA EQNEYGVVFT PNLSGLPQGL
HGFHVHENPS CDTSEKNGQT ILGGAAGGHY DPMKTGQHGF PWSNDSHLGD LPPLYVDMDG
NAVQPVLSPK ITLANLSGRA LMIHAGSDNH SDHPKALGGG GARLVCGVIK
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