Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0492 |
Symbol | thiE |
ID | 6962604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 550113 |
End bp | 550733 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381785 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_002264823 |
Protein GI | 209809285 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACC CTTATAAACT GTATTTGGTG ACAGATGACA AGCAAGATAT AGACACCTTA TGTAATGTAG TAAAAGAGGC AGTTAAAGGA GGTGTCACCA TGGTACAGAT CCGTGAAAAA CACGGAGATA TACGCGCATT TATTGAACGT TCAATTGCAG TAAAGAATGT ATTAAAAGAC AGTGGTGTAC CATTAATCAT AAATGATCGT GTTGATGTGG CATTGGCGGT GAGAGCGGAT GGAGTGCATT TAGGTCAATC CGATATGCCT GCAAACCTTG CTCGCCAATT GATTGGCCCT GATATGATTT TAGGGTTGTC TGTTGAAAAT GAAACGCAGT TGCGTGAAGC GCAAGATCTA CCTGTTGATT ACCTTGGTAT CAGTGCGATA TTTTCTACGC CAACTAAGAC TAATATTATT AAAGAGTGGG GCATTGACGG TTTAACGAAA GCCGTTAAAG AAAGTAAACT TCCTCTTGTG GCTATTGGTG GCATTAACGA AACGAACATT AAGAAAGTAG CAGATACTCA AGTGGATGGT ATTGCTTTAG TGTCGGCAAT TTGCCATGCA ACATCGCCAA AGCAGGCAAG TGAAGGGTTA CTTGAATTGA TGGGACGTTA A
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Protein sequence | MNNPYKLYLV TDDKQDIDTL CNVVKEAVKG GVTMVQIREK HGDIRAFIER SIAVKNVLKD SGVPLIINDR VDVALAVRAD GVHLGQSDMP ANLARQLIGP DMILGLSVEN ETQLREAQDL PVDYLGISAI FSTPTKTNII KEWGIDGLTK AVKESKLPLV AIGGINETNI KKVADTQVDG IALVSAICHA TSPKQASEGL LELMGR
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