Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0486 |
Symbol | thiD |
ID | 6962420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 545136 |
End bp | 545990 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643381779 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_002264817 |
Protein GI | 209809279 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCGT TACACACTAC CGCACTTTTA TCGACATTAT CTTCTACCAC ACCGATTGTA TTAACCATTG CTGGCTCTGA CAGTGGCGGC GGTGCAGGCA TCCAAGCCGA CATTAAAGCA ATTTCTGCAA CCGGCAGTTA TGCGTGTTCT GTTATTACCG CATTAACGGC TCAAAATACG CAAGGCGTTA CGGGCATTTA TCCAATCAGC AGTGAATTTG TTGAGCAGCA ACTTGATGCT GTTTTCTCTG ATTTGAATGT TATCGCCGTT AAAGTCGGCA TGTTAAGTGA TTCTGATATT ATCCGCTCTG TTGCGAAAAA AATAAAACAA TACTCTCCTC GCTATCTTGT GGTTGACCCT GTTATGGTCG CGACCAGCGG TGATCTTCTT CTGCAAGCAT CAGCTATTGA TAGCCTTAAA TCTGAACTGC TTCCCCTTGC CGATGTTATC ACGCCAAACC TTCCTGAAGC GGCGGCACTC ATTAATGCTA AAGTTCCCGA AAGTGAAGCT GAAATGACGG CAATGATTGA TGAACTTCGT CAATTAGGTG CTAAATCAGT CTTACTGAAA GGCGGGCATT TAGAAAAGGA TGAAAACAGT ACCGATTTAC TGATTTTATC TGATTCCATA GAACGCTTAT CGACACCTCG AATTGAAACT CGCAATACAC ACGGCACGGG CTGTACGTTA TCGTCAGCGA TTGCTTCGTA TTTAGCGCAA GGTCATGAAT TACTGGCTGC GGTAGCATTA GGTAAGCAAT ACATTACTCA AGCCATTATC CATGCCGATG AACTGAATAT TGGTCAGGGA CATGGGCCTG TGAATCACTT TTTTGCTTTA CATACTCCAG AGTAA
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Protein sequence | MPSLHTTALL STLSSTTPIV LTIAGSDSGG GAGIQADIKA ISATGSYACS VITALTAQNT QGVTGIYPIS SEFVEQQLDA VFSDLNVIAV KVGMLSDSDI IRSVAKKIKQ YSPRYLVVDP VMVATSGDLL LQASAIDSLK SELLPLADVI TPNLPEAAAL INAKVPESEA EMTAMIDELR QLGAKSVLLK GGHLEKDENS TDLLILSDSI ERLSTPRIET RNTHGTGCTL SSAIASYLAQ GHELLAAVAL GKQYITQAII HADELNIGQG HGPVNHFFAL HTPE
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