| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0483 |
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| Symbol | pspC |
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| ID | 6962559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 541920 |
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| End bp | 542306 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381775 |
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| Product | phage shock protein C |
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| Protein accession | YP_002264814 |
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| Protein GI | 209809276 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | [TIGR02978] phage shock protein C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG AACTGTATAG AGATACTCGA AATGGAAAAA TTGGTGGCGT CTGTGCAGGC
ATTGCTCAGT ACTTTGGTAT TGAACCTTGG ATAGTACGTA TATTAGTCGT CTCAGCAGCC
TTATTTAGTG CTGGTTTTCT GGTGATGTTA GCCTACTTTG CGGCGGTACT ATTCTTAGAT
AAAGCGCCGG CTGAAATGTA TTACCGAGCT GAAGAAAGCC GTGAGCACAC GGTAAAAAGT
AAGCCATGGC AAGCAGGTCA ATCGCCATCA GAAGTAATTA AGCGTGTTGA TAAAGACATG
GCGAGAATGG AAGAGAAAAT TCGTCGAATG GAAGGCTATG TTACGTCTTC TGAATACAAG
GTTCGCCGTG AATTTCGAAA CCTATAA
|
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| Protein sequence | MSKELYRDTR NGKIGGVCAG IAQYFGIEPW IVRILVVSAA LFSAGFLVML AYFAAVLFLD
KAPAEMYYRA EESREHTVKS KPWQAGQSPS EVIKRVDKDM ARMEEKIRRM EGYVTSSEYK
VRREFRNL
|
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