| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0481 |
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| Symbol | pspA |
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| ID | 6962561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 540997 |
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| End bp | 541662 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381773 |
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| Product | phage shock protein A |
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| Protein accession | YP_002264812 |
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| Protein GI | 209809274 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCACGCTT TGCAGACATC GTTAATGCTA ACGTTACTTC ATTATTGGAT
AAGGCTGAAA ATCCAGAAAA GATGATCCGT TTGATCATTC AAGAGATGGA AGACACGTTA
GTTGAAGTTC GTACCGCATC AGCAAAATCT ATCGCGGATA AAAAAGAACT GACACGTAAA
ATTGGATCAA TTGAAGCACA AGTCACCGAT TGGCAAGAAA AGGCGAGCTT AGCGTTAATT
AAACAACGTG AAGATTTGGC TCGTTCGGCG TTGATAGAAA AACAGAAAGT TCAGGATGTA
TTATCAAGCT TAAAAACAGA ATTTATTCTT GTTGAAGAGT GCATTGAGAA GTTAACCACA
GAATTAACCG AATTAGAGAC TAAACTGACA GAAACACGTG CTCGTCAACA AGCGTTAGTG
ATCCGTCAAC AAACAGCGCA ACATCGCAAT GAGATTAAAG GGCACACTCA TTCTGGTAAA
ACAGAGCGAG CAATGGCAAA GTTTGAGCAA TATGAGCGAC GCATTGATGA GCTAGATGCA
AAAGCAGATA CGTACTCAAT GGGCAAAGCG AACTCACTAG AGCAAGAATT TGCAGAGCTT
CAAGCGCAAG ATGAAATTGA AAAAGAGCTT GAGCGTCTAA AAGAACAAAT GAAGAAAGAC
GCATAG
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| Protein sequence | MGIFSRFADI VNANVTSLLD KAENPEKMIR LIIQEMEDTL VEVRTASAKS IADKKELTRK
IGSIEAQVTD WQEKASLALI KQREDLARSA LIEKQKVQDV LSSLKTEFIL VEECIEKLTT
ELTELETKLT ETRARQQALV IRQQTAQHRN EIKGHTHSGK TERAMAKFEQ YERRIDELDA
KADTYSMGKA NSLEQEFAEL QAQDEIEKEL ERLKEQMKKD A
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