| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0479 |
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| Symbol | sapA |
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| ID | 6962579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 538062 |
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| End bp | 539687 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381771 |
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| Product | peptide transport periplasmic protein precursor SapA |
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| Protein accession | YP_002264810 |
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| Protein GI | 209809272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TTGCGCGCAT ACTCATTGCT ACAACTGGAT TGTTAGGCCT AACAGGCTGT
TACGATACTG AATTAAAACA AACAATCCAC CAGCAAGGGT TTATTTATTG TGAATCAGGC
AATGTGGACT TCTTTAATCC ACAAACGTCT GATGGCAATA GCCTTCTTGA AGCCATCAGT
GCTCAAATAT ACGACGGCTT GCTCATTATC GATCCGGTGA CTCAGAAACC GTCTCCTAAT
CTAGCCACCT CTTGGACAGT AGATGAAACC GGCACCGTAT ATACGTTTAA TTTAGCGTCT
GATGTGCAAT TTCAAACCAC AGATTGGTTT ACGCCAACCA GAACCATGAA TGCTGATGAT
GTTGTTTTCA GTTTTAATCG GGTTCTTGAC CCAGAAAATC CATATCATAA TGTCAATTCT
GGACAATACC CTTGGTTTGA CAGCATTAAT TTTTCTCATA TGGTGAAATC AGTTAACGCC
ATTAATGAAC ACAAAGTTCA ATTCGAATTG ACCTCTCCTG ACAACACATT TTTATCTGCA
CTTTCTACGT CATACGCGGT CATTCATTCC CAAGAATACG CTCACCAATT AGCCGCGGCT
GATGAAAAAG AATTAATGGA CATAAAACCA ATTGGAACAG GTCCGTTTAA ACTCAAACAA
TTTCAAAAAA GCGAGCTTGT TCGTTTAAAA AGGCACGATG GCTACTGGCA AGGGCCAGCC
AAAATATCTC AAGTAGTGTT TGATATTTCA AGCCGAGGCA CTGGATCTTT AGCTAAATTA
CTTCGTAAAG AATGCGATGT CGTCGCAAAC CCTATATCAA GCCAATTACC TATCATTATT
GACAATGAAT CACTTACCTT GTTTTCACAG ACGGCAACCA ATGTGGCTTA CATTGCCGTT
AATATGAAAA ATCCACGGTT ACAAGACCAA CGTGTTCGCC AAGCCTTAAA TTTAGCTATT
GATCGCTCAA GCTTAATCAA TTCTGTGTAT TACAACTCAG GTATTGAGGC TCAAAGTATT
CTGCCACCAA CGTCTTGGGC GTATGGCAGT GACTCATCAT TAATTCGTTA TGATCTCAAT
TATGCAAAAG CTTTACTGCG TGAAGCCGGA GTAAAAGAAG GGTTAGAATT AACCATGTGG
GTGCCTTTAG ATAATCATCC CTACAATCCA AGTCCGAAAA AAGCGGCTGA AATTATTCAA
AACGACTTTG CAAAGTTAGG GATAAAATTA ATTCTTATCA CTAGTGACAT TATGGCAAAA
AGCGAATTGA CTGAAACTAA CATGGATTTA ATTTTAACCG GTTGGAATGC CAACAGTGCC
GATCCCGACA CCATGTTAAG ACCTCTACTT TCTTGTGATG CAAAACGAGC AGGCTTTAGC
TCTGCCAATT GGTGTAATGA AGAGTTCGAT TTCTTATTGG ATCTCGCAAA AGAAACCAAT
CAACCTCGAT ACAGAATGAA CATTTACCGC CAACTTCAAA ACTTGTTGAA TGAAGAGTTA
CCCATCATTC CACTTGCTCA TGGCGTCAAG TATCAAGCCA ATCAATCATC ATTAGAAGGT
TTTGTATTAA GTCCTTACAA CACCTATTCT TTTCATAATG TAAGCCGAAT TGAGGAGGTG
AACTAA
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| Protein sequence | MKTIARILIA TTGLLGLTGC YDTELKQTIH QQGFIYCESG NVDFFNPQTS DGNSLLEAIS
AQIYDGLLII DPVTQKPSPN LATSWTVDET GTVYTFNLAS DVQFQTTDWF TPTRTMNADD
VVFSFNRVLD PENPYHNVNS GQYPWFDSIN FSHMVKSVNA INEHKVQFEL TSPDNTFLSA
LSTSYAVIHS QEYAHQLAAA DEKELMDIKP IGTGPFKLKQ FQKSELVRLK RHDGYWQGPA
KISQVVFDIS SRGTGSLAKL LRKECDVVAN PISSQLPIII DNESLTLFSQ TATNVAYIAV
NMKNPRLQDQ RVRQALNLAI DRSSLINSVY YNSGIEAQSI LPPTSWAYGS DSSLIRYDLN
YAKALLREAG VKEGLELTMW VPLDNHPYNP SPKKAAEIIQ NDFAKLGIKL ILITSDIMAK
SELTETNMDL ILTGWNANSA DPDTMLRPLL SCDAKRAGFS SANWCNEEFD FLLDLAKETN
QPRYRMNIYR QLQNLLNEEL PIIPLAHGVK YQANQSSLEG FVLSPYNTYS FHNVSRIEEV
N
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