| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0477 |
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| Symbol | sapC |
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| ID | 6962581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 536226 |
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| End bp | 537113 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381769 |
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| Product | peptide transport system permease protein SapC |
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| Protein accession | YP_002264808 |
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| Protein GI | 209809270 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCTCAA ATAGTGTTTA TCAAGAAGAG CACATCCCAA CCCAAATGGA ACGATTTTGG
TTAAGCTATC GTGCTAACTC ATTAGCCATG TTCGGGGTTT GGTGTTTATT ATTGATTCTT
CTGGTTACCT TATTTTCTCC TTGGTTAAGT CCATATGATC CACAATGGCA GTCAGAAAAC
TTATTAATGC CCCCCTCATG GAGCACTGAA GGCGATGTTG CCTTTTTCTT AGGCACCGAT
GACTTAGGCA GAGACATTCT TTCTCGTTTG CTAATGGGCT CTCAGCTTAC CTTTGGTTAT
GCACTAGTTG TTGCTTTATT CTCTGGCTTC GTTGGTTGTG CTATCGGTAT TTTTGCTGGC
ATGACAAAAG GGTTATTGTC GAGTACGTTA AACCACTTAC TTGATACGAT CTTATCTATC
CCTTCTCTAT TGCTGGCCAT TATTTTTGTG GCCTTTTTAG GTTTTGGGGA ATTCAATATA
TTAATCGCAA TTTGGCTTGC TTTGATCCCT CGTTTTATTC GAGCCGTATA CACCGCAGTA
CACAATGAAA TCGAAAAAGA CTATATATTG GCGGCTCGTT TAGATGGCGC CAATGATTTT
TATTTATTGT GGAACTCTGT GTTGCCAAAC ATATTAACCA TCATCATTGC GGAAGCAACG
TTAGCCATTT CTGTCGCTAT TTTAGATATC ACAGCATTAG GATTTTTAGG CTTAGGCGCT
CAAGCTCCTA GCCCTGAGTG GGGCTCAATG TTAGGTGATT CTATCGAACT TATTTACACC
GCCCCATGGA CAGTAACCCT ACCTGGTATT GTGATTACCT TCACCGTTAT CATCGTCAAT
TTAGTTGGTG ACGGAATACA ACGCGCGTTA AATGCGGGGA TTGAATAA
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| Protein sequence | MRSNSVYQEE HIPTQMERFW LSYRANSLAM FGVWCLLLIL LVTLFSPWLS PYDPQWQSEN
LLMPPSWSTE GDVAFFLGTD DLGRDILSRL LMGSQLTFGY ALVVALFSGF VGCAIGIFAG
MTKGLLSSTL NHLLDTILSI PSLLLAIIFV AFLGFGEFNI LIAIWLALIP RFIRAVYTAV
HNEIEKDYIL AARLDGANDF YLLWNSVLPN ILTIIIAEAT LAISVAILDI TALGFLGLGA
QAPSPEWGSM LGDSIELIYT APWTVTLPGI VITFTVIIVN LVGDGIQRAL NAGIE
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