| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0457 |
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| Symbol | deoD |
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| ID | 6961887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 519939 |
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| End bp | 520649 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381749 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_002264789 |
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| Protein GI | 209809251 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACAC CACATATTAA TGCACAAGTT GGTGATTTCG CAGAAACGGT TCTAATGCCT
GGAGATCCAC TACGAGCTAA ATTCATTGCT GAAAACTTCT TGGAAGACGT AACTCAAGTG
TGTGACGTTC GTAATATGTT CGGTTACACC GGTACTTATA AAGGTAAAAA AGTCTCCGTT
ATGGGTCACG GCATGGGTAT CCCTTCTTGT TGTATCTATG TACACGAACT GATCGCGGAA
TTTGGTGTTA AAAATATCAT TCGCGTTGGC AGCTGTGGCG CAGTACACGA TGACGTGAAA
CTAATGGACG TTGTTATTGG AATGGGTGCT TCTACCGATT CAAAAGTTAA CCGTATTCGT
TTTAACAACC ATGATTTTGC AGCCATTGCT GATTTTGGTT TATTAGAAAC GGCGGTTGCT
CAAGCTCGTA AACTTAATGT ACCAGTAAAA GTAGGTAACG TATTCTCTGC GGATTTATTT
TACTCTCCAG AAACTGATCT GTTCGACAAA ATGGAAAAAT TAGGCATCTT GGGTGTTGAT
ATGGAAGCGG CTGGCATTTA TCGTGTGGCA GCGGATCTAG GCGCAAAAGC ACTTACTATC
CTAACGGTAT CTGACCACAT AAAACGCGGT GAGAAATTAA GTTCAGAAGA TCGTCAAAAA
TCATTCAATG ATATGATGAC AGTGGCACTA GAAACCGCCA TTAAACTGTA G
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| Protein sequence | MATPHINAQV GDFAETVLMP GDPLRAKFIA ENFLEDVTQV CDVRNMFGYT GTYKGKKVSV
MGHGMGIPSC CIYVHELIAE FGVKNIIRVG SCGAVHDDVK LMDVVIGMGA STDSKVNRIR
FNNHDFAAIA DFGLLETAVA QARKLNVPVK VGNVFSADLF YSPETDLFDK MEKLGILGVD
MEAAGIYRVA ADLGAKALTI LTVSDHIKRG EKLSSEDRQK SFNDMMTVAL ETAIKL
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