Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0456 |
Symbol | |
ID | 6961886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 518415 |
End bp | 519884 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381748 |
Product | conserved hypothetical protein, putative transposase |
Protein accession | YP_002264788 |
Protein GI | 209809250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3677] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCAACTG AAAAACTGCC GTTGGCTGCT AAAGGGTTAC AACTCAATTT TTGTAAAACA TTGGCGTGTG ACAATTTTGG TGATAGCGAT GAACAACATT ATTTAGTTCA ACGCACAAAC CCGAAGCGAC CTGCATTAGT TTGTCGGAAA TGTGGTGCTT TTCCTCCCTT AATCAATAAC AATGAAGTAT TGAACGAACT TGCACGTCAG CAAAAAGTGC AATGCCATTC TTTACCTGCT TGTAATAATT CCCATTGCTC TCACTTTGGT TTAGATGTTC TTACTCATCG TGAGCTTTAT CATGCCTTCG GTTATAGTGG TGATCGTCAA CGTTATCGTT GTAAATCTTG CGCTTCTACC TTTGTCGATA AATGGTCTGG TGAAAACCAA AAAAGCCCTA TTCAACAAAA GATTTTAGGT TTTTTATTTA CTGGGTACTC TGTACGCGAG ATTTGCCGTC GTTTACATAT AAATCCTAAA ACCTTTTATG ACCATATTAA CCAAATAGCC AGTCGTTGCC GACGTCATAT GTCTTTGTTT GATGTCCGTT TACAGCATGA CAGAACCCAA ATTCAATTAG CATCAAATGC CACCCCATTG CAGCCTCTAA GTAATAATGG GGTTTTCTGG TACTGTACAG CAGAAATGAG TTCAGGTTAT CTCATCGCTC AACATATTAA CTATTCAGAA AATGACCAAC CTGGTAATCA GTTGGATCAC GACCCGTTCT TACCCGAAGC ACAATATTTA TCGAATACCT TTATTGGTGA AGCCAATTCT CAATCAGCTA TCGCCACAAA CAGTATATTC AGCCGCGTAG ACAGCAAATA TCAAGAGATA TTAGCCCGTG CAAATGTTGA AGATCCTTTA GGTAATTACG TCTCTTTAAA TTACCCATCG AAAGGGGCGT TAATACGACC GCCTTATACG TCTTATGCTC ATTATTTAGA AATCCAAGAC GCTTTTTCAC ATTGTGATTC TATTGAAATT TATATGCCTC AAGAGCCTAT GCTTCGATCG GCAGCAATGT CTGTTTTTCT TGAACGCATT AAAAACAACA ATATTGATTT ACTGTACGTC ACTCAAGACG ATGCTTTTCC TATTGAGCAA AGCGGCGAGA AAGTAGATAT TCATCTTGTG GGTTGGTGGC GAGATCGCTG GGCTTTTACC GAAGTCTCAG GGCTACATAA AGGGATTTGC CATCTTAATG GCGCAGAGAA CAATGAACAA TATTGGTTAA AGCGTGCTTC TGCCACTTCA GCCGCTGATT ATCAGCAACG TTTTTATAAT CAATTTACAA GTTTAGTGAA TGAACCGAGA CGAAAACTTC GTCCGGCTAG CCTACTTCCT TTATTAGATA TCTTTAGAGC ATGGCATAAT CTGTGTCATC AAGATAAACT AGGTACAACA CCAGCACAAA AGTTAGGGTT AATTTCAAAA CCCATTACAC TTGCTGAATT ATTAAGTTAG
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Protein sequence | MPTEKLPLAA KGLQLNFCKT LACDNFGDSD EQHYLVQRTN PKRPALVCRK CGAFPPLINN NEVLNELARQ QKVQCHSLPA CNNSHCSHFG LDVLTHRELY HAFGYSGDRQ RYRCKSCAST FVDKWSGENQ KSPIQQKILG FLFTGYSVRE ICRRLHINPK TFYDHINQIA SRCRRHMSLF DVRLQHDRTQ IQLASNATPL QPLSNNGVFW YCTAEMSSGY LIAQHINYSE NDQPGNQLDH DPFLPEAQYL SNTFIGEANS QSAIATNSIF SRVDSKYQEI LARANVEDPL GNYVSLNYPS KGALIRPPYT SYAHYLEIQD AFSHCDSIEI YMPQEPMLRS AAMSVFLERI KNNNIDLLYV TQDDAFPIEQ SGEKVDIHLV GWWRDRWAFT EVSGLHKGIC HLNGAENNEQ YWLKRASATS AADYQQRFYN QFTSLVNEPR RKLRPASLLP LLDIFRAWHN LCHQDKLGTT PAQKLGLISK PITLAELLS
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