| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0455 |
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| Symbol | |
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| ID | 6961885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 517426 |
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| End bp | 518406 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381747 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_002264787 |
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| Protein GI | 209809249 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGT CACCTTCTCA AGATCACACT GAAAACACCG ATATGTTGAC AGAAATCGCC
ATCCTTTATT ATCAAGAAGG AGCGACTCAA GAAGAGATCT CGAAAAAATT TGGCTTATCT
CGCGCTAAAG TCGGACGCAT GCTTAGAAAA GCACGAGAAG AAGGTATTGT CGAAATTACC
GTAAAATTTC ATCCCGTTTA TAGCGCACAG CTAGAACAAA AGTTGGTTGA AAAATTCAAC
TTAAAACGCG CATTGATTTC ATTAGATCAA CCCAATACCA GTGAACAACG CAAGCAAGTT
GCCGCTCTCG TTAGCTCTTA TTTAAACAAT AACTTGCAAG ATGATATGGC GGTTGCCGTT
GGTCAAGGTC AAAATGTTGC TGCTGTCGCT GATCACGCTG GGATTGTCTC CCATCGTAAT
GCTCGATTCG TATCCGCTAT CGGTGGTACA CACCGCAGTG GTGATATTAT TAACGCTGAC
CATATTTGTC GACGTTTAGC AAAAAAATAC GGCGGAAGCA GTGAAACGCT TTACGCACCT
GCGTATGTGA ATGACCCGAG CCTTCGTTCT GCTTTTATGG AGCACGCAAC AATTAAGGAA
ACACTGAACC AAGCCAGAAA AGCAGAGTTT GCATTGGTTG GGATCGGTGA TATGGATGAA
AACAGCCACA TGGTTAAACT TGGCTTTTTT ACGCCTAAAG AATTTGTAGA AGCGCGTTTA
AATGATGGCA TAGTGGGTGA TATTGGCGGA TTTGATTTCT TTAAATTAGA TGGCAGTGAT
GCGGATACGT TAATGCGAGG AAGAGTTATT GGCTTAGAAA TGGAAGATCT TCGTCAAATT
CCAAACGTAG TCGCAATGGC AAGTGAAAGT CGCAAAGCAT TATCAATCAT GGGTGCATTA
AGAACAGGTG TTATTGATGT TCTTGCCACA AGCGTTAGTT GCGCGATGGC CCTGCTTAAT
CTCGCAGAAA ATGAACGCTA A
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| Protein sequence | MSSSPSQDHT ENTDMLTEIA ILYYQEGATQ EEISKKFGLS RAKVGRMLRK AREEGIVEIT
VKFHPVYSAQ LEQKLVEKFN LKRALISLDQ PNTSEQRKQV AALVSSYLNN NLQDDMAVAV
GQGQNVAAVA DHAGIVSHRN ARFVSAIGGT HRSGDIINAD HICRRLAKKY GGSSETLYAP
AYVNDPSLRS AFMEHATIKE TLNQARKAEF ALVGIGDMDE NSHMVKLGFF TPKEFVEARL
NDGIVGDIGG FDFFKLDGSD ADTLMRGRVI GLEMEDLRQI PNVVAMASES RKALSIMGAL
RTGVIDVLAT SVSCAMALLN LAENER
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