Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0449 |
Symbol | |
ID | 6962432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 508913 |
End bp | 510577 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381742 |
Product | hypothetical protein |
Protein accession | YP_002264782 |
Protein GI | 209809244 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.380291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTC TCTTTAATGA GGAAGGTTAT ATGCTTTTAG AACGTATTGA AGTTTCAGGA TTTCGTGGCA TAAAACGCCT ATCTCTTTCT TTTGAACAAC TCACCACTCT GATAGGTGAA AATACATGGG GCAAATCATC ATTACTTGAT GCCCTATCTA TCGCTCTGCC TATTTCAGGG GAGCTGCATC AATTTTCGTT AACTGACTTC CATCAAGACC ATTCCATCTC TTACACTCAA GATCAGCACA TTCAAATCAT CATTACTTTT CAGACCACAG AAAAAAATGA ATACAGAGCT GGCCGCTATA GAAAACTCGC TTCATTATGG CAACCAGATG AAAACAGCCA CGCACAACGT ATTTATTACC GTATTAGTGC AACAAATAAT GACGGAAAAA TAACGGCATC CCATTCTTTT TTAGATAATA AAGGCCGTAT TCTTCGTTAT CATAAAATTC ATATGCTTGT GTATGAGCTT ATTCGCTTAC ACCCTGTCAT TCGTATACGC GACGCCAGAC GGCTTCACCC AGATGGAGAC ACGGCGCCTT TACCTGATGA TCGCATTGAG CGACGTATAA ATAATACCTG CCGCCGTCTA CTTACCTCTC CTGGTCAAGT TAGCAGTGGT GAAATAAAAA GTGCTCTCCA TTCAATGCAA GCGTTAGTCG AGCACTACTT TGCATTTAAA AATCATAATC GACATACACA ACATCGAATT CATGATGATC TCTTCTTTGG CCAAAAAACC GAAGGTATCT CATTAACCCA ATTTATTAAT CAAAACAAAA GCAAACAAAC CAAACTATTA TTGCTTGGTT TACTTAATAC GTATTTAAGA GCAAAAGGAC CGAATGTCCT CAAACCATCA GCTCGACCTC TAATGATTGT GGAAGATCCC GAGGGGCGAT TACACCCAAC CCAACTAATA CAAGCATGGA CATTGCTTAA TCATATTCCC ATGCAAAAAA TATTAACAAC AAACAGCAGC GAGCTACTGA GTACCGTTCC CCTTTGCTCT ATACGTCGTT TGGTTCGAGA ATCTGACTCT ACCTCTTGCT ATTCAGTCTC TCCGACCTGC CTTTCTAAAG ACGATTTACG CCGAATTACT TTCCATGTCC GATTCCAACG ATCAAATGCC TTATTCGCTC GTTGTTGGTT ATTGGTTGAA GGGGAAACTG AGGTTTGGTT GTTTAATGAA ATGGCACGAA TTTTAGGTTA TAACTTAGCA GCAGAAGGCA TTCAAATCAT CGAATTTGCA CAATCAGGAT TAAAGTCACT CATAAAAATC GCGAAAACCT TACACATTGA ATGGCATGTA GTGACCGATG GTGATCCCGC AGGGAAAAAA TACGCTTTTG CGGTAAAAAG TCAGTTAGAT AATGAACACC AACGCCACCG TTTAACTGAG CTTCCACACA AAGATATTGA GCATTATTTA TATCACCATG GTTTTGAGCC CTTATTTCGA GAGCTTTCAA ATACATCAGT AGATCAACCT GTGCCGCCCA AAAAAATCAT TATAAAAACA CTAAAAAAAT ACGCTAAGCC TGATTTAGCC TTGGCGATAG TGCAATACTG TGAAGATAAT GGACCCGAAA GTATTCCACT CCTTCTACGT TGGACACTAA AACGAACATT AACCATGGCA AAAGGCCAAG GCTAA
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Protein sequence | MTTLFNEEGY MLLERIEVSG FRGIKRLSLS FEQLTTLIGE NTWGKSSLLD ALSIALPISG ELHQFSLTDF HQDHSISYTQ DQHIQIIITF QTTEKNEYRA GRYRKLASLW QPDENSHAQR IYYRISATNN DGKITASHSF LDNKGRILRY HKIHMLVYEL IRLHPVIRIR DARRLHPDGD TAPLPDDRIE RRINNTCRRL LTSPGQVSSG EIKSALHSMQ ALVEHYFAFK NHNRHTQHRI HDDLFFGQKT EGISLTQFIN QNKSKQTKLL LLGLLNTYLR AKGPNVLKPS ARPLMIVEDP EGRLHPTQLI QAWTLLNHIP MQKILTTNSS ELLSTVPLCS IRRLVRESDS TSCYSVSPTC LSKDDLRRIT FHVRFQRSNA LFARCWLLVE GETEVWLFNE MARILGYNLA AEGIQIIEFA QSGLKSLIKI AKTLHIEWHV VTDGDPAGKK YAFAVKSQLD NEHQRHRLTE LPHKDIEHYL YHHGFEPLFR ELSNTSVDQP VPPKKIIIKT LKKYAKPDLA LAIVQYCEDN GPESIPLLLR WTLKRTLTMA KGQG
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