Gene VSAL_II0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0449 
Symbol 
ID6962432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand
Start bp508913 
End bp510577 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content40% 
IMG OID643381742 
Producthypothetical protein 
Protein accessionYP_002264782 
Protein GI209809244 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.380291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTC TCTTTAATGA GGAAGGTTAT ATGCTTTTAG AACGTATTGA AGTTTCAGGA 
TTTCGTGGCA TAAAACGCCT ATCTCTTTCT TTTGAACAAC TCACCACTCT GATAGGTGAA
AATACATGGG GCAAATCATC ATTACTTGAT GCCCTATCTA TCGCTCTGCC TATTTCAGGG
GAGCTGCATC AATTTTCGTT AACTGACTTC CATCAAGACC ATTCCATCTC TTACACTCAA
GATCAGCACA TTCAAATCAT CATTACTTTT CAGACCACAG AAAAAAATGA ATACAGAGCT
GGCCGCTATA GAAAACTCGC TTCATTATGG CAACCAGATG AAAACAGCCA CGCACAACGT
ATTTATTACC GTATTAGTGC AACAAATAAT GACGGAAAAA TAACGGCATC CCATTCTTTT
TTAGATAATA AAGGCCGTAT TCTTCGTTAT CATAAAATTC ATATGCTTGT GTATGAGCTT
ATTCGCTTAC ACCCTGTCAT TCGTATACGC GACGCCAGAC GGCTTCACCC AGATGGAGAC
ACGGCGCCTT TACCTGATGA TCGCATTGAG CGACGTATAA ATAATACCTG CCGCCGTCTA
CTTACCTCTC CTGGTCAAGT TAGCAGTGGT GAAATAAAAA GTGCTCTCCA TTCAATGCAA
GCGTTAGTCG AGCACTACTT TGCATTTAAA AATCATAATC GACATACACA ACATCGAATT
CATGATGATC TCTTCTTTGG CCAAAAAACC GAAGGTATCT CATTAACCCA ATTTATTAAT
CAAAACAAAA GCAAACAAAC CAAACTATTA TTGCTTGGTT TACTTAATAC GTATTTAAGA
GCAAAAGGAC CGAATGTCCT CAAACCATCA GCTCGACCTC TAATGATTGT GGAAGATCCC
GAGGGGCGAT TACACCCAAC CCAACTAATA CAAGCATGGA CATTGCTTAA TCATATTCCC
ATGCAAAAAA TATTAACAAC AAACAGCAGC GAGCTACTGA GTACCGTTCC CCTTTGCTCT
ATACGTCGTT TGGTTCGAGA ATCTGACTCT ACCTCTTGCT ATTCAGTCTC TCCGACCTGC
CTTTCTAAAG ACGATTTACG CCGAATTACT TTCCATGTCC GATTCCAACG ATCAAATGCC
TTATTCGCTC GTTGTTGGTT ATTGGTTGAA GGGGAAACTG AGGTTTGGTT GTTTAATGAA
ATGGCACGAA TTTTAGGTTA TAACTTAGCA GCAGAAGGCA TTCAAATCAT CGAATTTGCA
CAATCAGGAT TAAAGTCACT CATAAAAATC GCGAAAACCT TACACATTGA ATGGCATGTA
GTGACCGATG GTGATCCCGC AGGGAAAAAA TACGCTTTTG CGGTAAAAAG TCAGTTAGAT
AATGAACACC AACGCCACCG TTTAACTGAG CTTCCACACA AAGATATTGA GCATTATTTA
TATCACCATG GTTTTGAGCC CTTATTTCGA GAGCTTTCAA ATACATCAGT AGATCAACCT
GTGCCGCCCA AAAAAATCAT TATAAAAACA CTAAAAAAAT ACGCTAAGCC TGATTTAGCC
TTGGCGATAG TGCAATACTG TGAAGATAAT GGACCCGAAA GTATTCCACT CCTTCTACGT
TGGACACTAA AACGAACATT AACCATGGCA AAAGGCCAAG GCTAA
 
Protein sequence
MTTLFNEEGY MLLERIEVSG FRGIKRLSLS FEQLTTLIGE NTWGKSSLLD ALSIALPISG 
ELHQFSLTDF HQDHSISYTQ DQHIQIIITF QTTEKNEYRA GRYRKLASLW QPDENSHAQR
IYYRISATNN DGKITASHSF LDNKGRILRY HKIHMLVYEL IRLHPVIRIR DARRLHPDGD
TAPLPDDRIE RRINNTCRRL LTSPGQVSSG EIKSALHSMQ ALVEHYFAFK NHNRHTQHRI
HDDLFFGQKT EGISLTQFIN QNKSKQTKLL LLGLLNTYLR AKGPNVLKPS ARPLMIVEDP
EGRLHPTQLI QAWTLLNHIP MQKILTTNSS ELLSTVPLCS IRRLVRESDS TSCYSVSPTC
LSKDDLRRIT FHVRFQRSNA LFARCWLLVE GETEVWLFNE MARILGYNLA AEGIQIIEFA
QSGLKSLIKI AKTLHIEWHV VTDGDPAGKK YAFAVKSQLD NEHQRHRLTE LPHKDIEHYL
YHHGFEPLFR ELSNTSVDQP VPPKKIIIKT LKKYAKPDLA LAIVQYCEDN GPESIPLLLR
WTLKRTLTMA KGQG