| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0444 |
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| Symbol | |
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| ID | 6961875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 504288 |
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| End bp | 505172 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381737 |
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| Product | binding-protein-dependent transport system inner membrane component |
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| Protein accession | YP_002264777 |
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| Protein GI | 209809239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATGC AGCAAAGTAA ACATTTTTCA CTAAATCGAT TAGATTGGAT ACTACTGGCC
ATTGTTGCTG GTAGTGTCTC ATGGTTATTT CTCAAAGACA GTGGATCATT GACCTACCAT
TGGCAATGGT CCAAAGCCAT TTCTTTACTC TTTACCAGTA AATCTGATGG CTCTCTGCCT
TATTTTTTTG ATGGGATAAT TTCCACATTA CGTTTAACGT TTTTGGGAAT GATCTTTGCT
GTGTTGTTTG GTACTTTATT GGGATTGGGC CGTCGCTCTA ACATCACATT TATTCGTGCC
CTTTCGAACA GTTATATACA ACTGATTCGA AATATTCCTC CCCTTGTTTT TATTTTCATC
TTTTACTTTT TTATTGCTAA TCAACTTGTG CCTTTATTTG GTTTAGAGCA TCTATTACGA
GAGCACAGTG GCAATATTAA CCCACTTCAG TCCGTTCTAT TCGGCCCTGC GTCTTTATGG
GAAAATCTAA TCTCAGGGGT ACTTTGTATT GGAATGATCT CTGCTGCTTA TATCGGCGAA
GTGGTTCGTT CAGGATTAGA CGCAATACCA AAAGGACAGC ATGAGGCAGC AAGAAGTTTA
GGCTTATCAA CTTGGCATCG TTATCGCTAT ATTATTGCAC CCCAAGTGTT TAAAGTGATC
ATCCCTCCTC TTGCAGGTCA GTGTATTTCG TTAGTGAAAG ACTCTTCTAT TATATCCCTA
ATATCGATAC AAGAATTAAC CTTTGTTGGT ACTGAAATTG CGAACTCAAG CGGAATGATC
TTTGAAATTT GGACCGTGGT TGCTCTCTGT TATTTCATTC TTTGTTTTAG CTTATCTCGC
CTGTTCTCGT ATTGGGAATC AACAACAGAA AAAGCTCAGG GCTAA
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| Protein sequence | MPMQQSKHFS LNRLDWILLA IVAGSVSWLF LKDSGSLTYH WQWSKAISLL FTSKSDGSLP
YFFDGIISTL RLTFLGMIFA VLFGTLLGLG RRSNITFIRA LSNSYIQLIR NIPPLVFIFI
FYFFIANQLV PLFGLEHLLR EHSGNINPLQ SVLFGPASLW ENLISGVLCI GMISAAYIGE
VVRSGLDAIP KGQHEAARSL GLSTWHRYRY IIAPQVFKVI IPPLAGQCIS LVKDSSIISL
ISIQELTFVG TEIANSSGMI FEIWTVVALC YFILCFSLSR LFSYWESTTE KAQG
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