| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0433 |
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| Symbol | |
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| ID | 6961867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 489281 |
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| End bp | 490876 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381727 |
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| Product | transporter, BCCT family |
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| Protein accession | YP_002264767 |
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| Protein GI | 209809229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTA CGGATAAGTA CAGTATTGAC AGTACTGATT ATGAAGTTGG GCAAGACAAT
ATTCAAAAAT GGGGTTTTGA TATACATAAC CAAGTTTTTG GTATTAGCGC TGGCGCAATT
ATTTTATTTC TTACTGTTCT TCTGGTTATG GACCCAACAG AAGCAAAATC CATTCTTGAC
GGCGTAAAAT TAAGCATCAT AAATAACTTT GATGGTCTAT TTATGTGGTC TAGTAATATC
TTCCTTGTTT TCAGTTTACT TCTAATTATC TCTCCTTTTG GTAAGATCCG TCTTGGTGGC
GATAACGCAA AACCAGAACA TTCCACTATT TCATGGATGG CAATGCTATT TGCTGCTGGC
ATGGGTATTG GGTTAATGTT TTATGGTGTT GCTGAACCTG TCGCTTACTT TACTGATTGG
TATGGTACAC CGCTAGCGGT TGAACCATTG ACAGAAGAAG CAAGAAAATT AGCATTAGGT
GCAACGATGT ACCACTGGGG TATTCACCCT TGGGCTATTT ACGGTATTGT TGCTCTTTCT
TTAGCTTTCT TTACGTTTAA CAAAGGCTTA CCACTATCTA TGCGTTCTGT TTTTTATCCT
ATTTTAGGTG ACAGAACATG GGGTTGGTTT GGTCATATCA TTGATATTTT GACCGTATTA
GCGACGTTGT TTGGCCTGGC AACCTCTCTT GGTTTAGGTG CACAACAAGC CGCTGGTGGT
ATCAACCATG TATTTGGCAC CAACGGTGGC GTCAATATGC AAATTGGTGT CATCATCTTT
GTTACCATGC TTGCAATGAT CTCGGTTATT CGTGGGATTG ATGGCGGTGT AAAACTGCTT
AGTAATGTAA ATATGCTTGT TGCTCTTGCC TTACTTATTT TCATCATCAT CATCGGATTT
TCTGATGTAA TGGCAGCAAT ACCATTAACG GTTATGGGCT ACATTGAAAA TATCATCCCT
CTAAGTAATC CACACGGTCG CCCTGATGAA GGTTGGATGC ACGGCTGGAC CGTATTCTAC
TGGGCATGGT GGATTTCATG GTCTCCGTTT GTAGGTATGT TCATTGCACG TGTTTCTAAA
GGTCGTACTG TTCGTCAATT CTTGATTTCA GTAATGCTAA TTCCAACAGC CGCAACCGCA
TTATGGATGT CAGCTTTTGG TGGTATAGCA ATGGAACAAG TCACAAATAA AGTCGGTGAG
CTTGGTGAGA ATGGTCTACA AGACATAACC ATGGCATTAT TTAATATGTA TGATGCATTG
CCAATGAGTA CAGCTCTTTC TGTGATTTCA ATCATCCTAA TCATGGTGTT CTTTGTAACA
TCATCAGATT CAGGTTCATT GGTTATCGAC AGTATTACCG CTGGTGGTAA AGTTGATGCG
CCAGTACCAC AACGCATTTT CTGGGCAATC GTTCAAGGTT CTATCGCTGC CGTATTATTA
TGGGTTGGTG GTACTGAAGC GATGCAAGCA CTGCAAGCAG GTACTGTTTC TACGGCACTG
CCATTCACCT TTATCTTACT TCTAATGTGT GTAAGTTTAG TGAAAGGGTT TAGTACTGAG
AAATACGGTA CGGTTCCAAA AACAAGTAAA GCTTAA
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| Protein sequence | MSTTDKYSID STDYEVGQDN IQKWGFDIHN QVFGISAGAI ILFLTVLLVM DPTEAKSILD
GVKLSIINNF DGLFMWSSNI FLVFSLLLII SPFGKIRLGG DNAKPEHSTI SWMAMLFAAG
MGIGLMFYGV AEPVAYFTDW YGTPLAVEPL TEEARKLALG ATMYHWGIHP WAIYGIVALS
LAFFTFNKGL PLSMRSVFYP ILGDRTWGWF GHIIDILTVL ATLFGLATSL GLGAQQAAGG
INHVFGTNGG VNMQIGVIIF VTMLAMISVI RGIDGGVKLL SNVNMLVALA LLIFIIIIGF
SDVMAAIPLT VMGYIENIIP LSNPHGRPDE GWMHGWTVFY WAWWISWSPF VGMFIARVSK
GRTVRQFLIS VMLIPTAATA LWMSAFGGIA MEQVTNKVGE LGENGLQDIT MALFNMYDAL
PMSTALSVIS IILIMVFFVT SSDSGSLVID SITAGGKVDA PVPQRIFWAI VQGSIAAVLL
WVGGTEAMQA LQAGTVSTAL PFTFILLLMC VSLVKGFSTE KYGTVPKTSK A
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