Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0424 |
Symbol | |
ID | 6961859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 476655 |
End bp | 477782 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643381717 |
Product | putative fatty acid desaturase |
Protein accession | YP_002264759 |
Protein GI | 209809221 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG GATCTAAACC ACCAATTATT TGGTTGAATG TATTTATTTT TACATCAAGT CTGTTACTTG CTTTAGTTGC AACCCCTATT TATGCCTATT ATAACGGCCT AGGTACTGAG CACTGGATAT GGCTGCTGCT AACTTTTAGC TTTTGTAATC TTTCTATAAC AGCTGGCTAT CATCGTTTAT GGTCTCATAA AGCTTATAAT GCTCATCCTG CATTACGTTT CATTTTTGCT TTAGGGGGCG CCTTTGCCCT ACAAAATAGT GCCTTACATT GGTCATCTGA TCATAGAGTT CATCATCGTC ATGTAGATGA TAATGATAAA GACCCTTATT CAGCAAAGCG CGGATTTTGG TTTTCACATA TAGGCTGGAT GCTACGTCAT TATAAACCAG CTAAATTTGA TGATTATTCA AACTGCCGTG ATTTACAAAA AGATAAAATA GTCATGTGGC AACATAATCA TTATGTTCCC CTTGCTTTAG TCATGAATCT AGGTGTACCA CTGCTTCTTG GTGTTATTTA TGGCGACATC CTTGGCATGC TTTTAATGAT AGGTGCAGTA CGTTTAGTAT TAAACCACCA CACGACTTTT TTCATTAATT CACTCGCTCA TATCTGGGGT AGCCAACCTT ATACAGAGAA AAATACCGCT CGTGATAATG GTATTTTAGC GGTCCTGACT TTTGGGGAAG GTTATCATAA CTACCACCAC ATATTCGAAA ATGACTATAG AAATGGCATT TATTGGTGGC AATATGATCC AACTAAATGG TTAATTAAAA GCTGCTCTTG GTTAGGATTA ACAAGCAAAC TTCGCATTAG CCCTCAAGCT AAAGTAGAAA AAGCACAAGC GTTAATGTTA CGAAAAAAAG CAGAAGATAA AATTGCAAAG CTTCATAATT ATCATGCCGT AAAAGAGCAT TTAGAGGCCG AGTACGAAGC CCTGATTGAA CGCATGTCTG AATACTATGA TTCAAAAAAG CAATTACTTG AACATAAGAA AAATGCATTA TCAAAACAAT ATGAAATCGC GGTTCTAAAC GTTCAACATA AGCAAATTAA AATGCAGTTT GAACAACAGA AAAAAGCATG GAACCGCCTA GTGCTTCAAT ATGTTTAA
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Protein sequence | MNKGSKPPII WLNVFIFTSS LLLALVATPI YAYYNGLGTE HWIWLLLTFS FCNLSITAGY HRLWSHKAYN AHPALRFIFA LGGAFALQNS ALHWSSDHRV HHRHVDDNDK DPYSAKRGFW FSHIGWMLRH YKPAKFDDYS NCRDLQKDKI VMWQHNHYVP LALVMNLGVP LLLGVIYGDI LGMLLMIGAV RLVLNHHTTF FINSLAHIWG SQPYTEKNTA RDNGILAVLT FGEGYHNYHH IFENDYRNGI YWWQYDPTKW LIKSCSWLGL TSKLRISPQA KVEKAQALML RKKAEDKIAK LHNYHAVKEH LEAEYEALIE RMSEYYDSKK QLLEHKKNAL SKQYEIAVLN VQHKQIKMQF EQQKKAWNRL VLQYV
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