Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0409 |
Symbol | |
ID | 6962566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 460285 |
End bp | 460692 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643381704 |
Product | hypothetical protein |
Protein accession | YP_002264746 |
Protein GI | 209809208 |
COG category | [S] Function unknown |
COG ID | [COG2501] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000857637 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATC AAGAAGAATT TGAAGTAGAA GCGATTGGTG TTGAAGTTAA CATGCAACCA ATTGAACTAT ACAAAGTATT AAAAATTGCC AATGTTGTAA ATGGCGGCGG TGAAGCTAAA CACATGATTG GTGAAGGCTA TGTGGGTGTT AATGGCGAAT TAGAACAACG TAAACGTCGT AAAATGTACG ATGGTGATGT AATTGAATTC AATGAAGAAT ATTACGTTGT GATCTGTGAT ACGCCAGTTG GCGAGCTTCC AGAAATCATA GAAAAACCAG AACCAATGGT TATCCAACCA GCGCCTTCTG AGCCAAAACC TAAAAAAGAA AAAAAGAAAA AACAGAAGCC AGAGATCCCA ACAACGATTG ACCCAAACAG TGGTCGTAAA TCGATAAACT TCTTCTAA
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Protein sequence | MSDQEEFEVE AIGVEVNMQP IELYKVLKIA NVVNGGGEAK HMIGEGYVGV NGELEQRKRR KMYDGDVIEF NEEYYVVICD TPVGELPEII EKPEPMVIQP APSEPKPKKE KKKKQKPEIP TTIDPNSGRK SINFF
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